RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 CMTR1Q8N1G2 835 aaKnown RBP22.03■■□□□ 1.12
COPE-209ENST00000599964 SNX21Q969T3 373 aa22.03■■□□□ 1.12
COPE-209ENST00000599964 BTBD7Q9P203 1132 aa22.03■■□□□ 1.12
COPE-209ENST00000599964 PNMA6FA0A0J9YX94 578 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 CYTH3O43739 400 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 CD2BP2O95400 341 aaKnown RBP22.02■■□□□ 1.12
COPE-209ENST00000599964 LARGE1O95461 756 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 ICAM1P05362 532 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 BCRP11274 1271 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 STAT3P40763 770 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 TMEM132BQ14DG7 1078 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 HSCBQ8IWL3 235 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 NECAB1Q8N987 351 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 MTMR8Q96EF0 704 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 PIGSQ96S52 555 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 RNF26Q9BY78 433 aaPredicted RBP22.02■■□□□ 1.12
COPE-209ENST00000599964 SPATC1LQ9H0A9 340 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 ZNF214Q9UL59 606 aaPredicted RBP22.02■■□□□ 1.12
COPE-209ENST00000599964 CNTNAP5Q8WYK1 1306 aa22.02■■□□□ 1.12
COPE-209ENST00000599964 SLC25A27O95847 323 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 SNAP25P60880 206 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 SSRP1Q08945 709 aaKnown RBP22.01■■□□□ 1.11
COPE-209ENST00000599964 QRICH1Q2TAL8 776 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 NOM1Q5C9Z4 860 aaKnown RBP22.01■■□□□ 1.11
COPE-209ENST00000599964 SNRNP48Q6IEG0 339 aaKnown RBP22.01■■□□□ 1.11
COPE-209ENST00000599964 FBXO11Q86XK2 927 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 REPS2Q8NFH8 660 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 TMX3Q96JJ7 454 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 AMNQ9BXJ7 453 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 CWC22Q9HCG8 908 aaKnown RBP22.01■■□□□ 1.11
COPE-209ENST00000599964 RAVER2Q9HCJ3 691 aaKnown RBP22.01■■□□□ 1.11
COPE-209ENST00000599964 TXNRD2Q9NNW7 524 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 CCPG1Q9ULG6 757 aa22.01■■□□□ 1.11
COPE-209ENST00000599964 COL11A1P12107 1806 aaPredicted RBP22.01■■□□□ 1.11
COPE-209ENST00000599964 CNMDO75829 334 aa22■■□□□ 1.11
COPE-209ENST00000599964 FUT2Q10981 343 aa22■■□□□ 1.11
COPE-209ENST00000599964 KIF22Q14807 665 aa22■■□□□ 1.11
COPE-209ENST00000599964 NTRK3Q16288 839 aa22■■□□□ 1.11
COPE-209ENST00000599964 TKFCQ3LXA3 575 aa22■■□□□ 1.11
COPE-209ENST00000599964 RIOX2Q8IUF8 465 aa22■■□□□ 1.11
COPE-209ENST00000599964 CCDC83Q8IWF9 413 aa22■■□□□ 1.11
COPE-209ENST00000599964 PIBF1Q8WXW3 757 aa22■■□□□ 1.11
COPE-209ENST00000599964 LLPHQ9BRT6 129 aaKnown RBP22■■□□□ 1.11
COPE-209ENST00000599964 V9GY48 417 aaPredicted RBP22■■□□□ 1.11
COPE-209ENST00000599964 K7ELQ4 463 aaPredicted RBP21.99■■□□□ 1.11
COPE-209ENST00000599964 GPR25O00155 361 aa21.99■■□□□ 1.11
COPE-209ENST00000599964 PRPF3O43395 683 aaKnown RBP21.99■■□□□ 1.11
COPE-209ENST00000599964 SLC4A3P48751 1232 aa21.99■■□□□ 1.11
COPE-209ENST00000599964 SP3Q02447 781 aa21.99■■□□□ 1.11
COPE-209ENST00000599964 SLC35G1Q2M3R5 365 aa21.99■■□□□ 1.11
COPE-209ENST00000599964 POTEEQ6S8J3 1075 aa21.99■■□□□ 1.11
COPE-209ENST00000599964 SHCBP1Q8NEM2 672 aa21.99■■□□□ 1.11
COPE-209ENST00000599964 SLC26A6Q9BXS9 759 aa21.99■■□□□ 1.11
COPE-209ENST00000599964 MROH8Q9H579 483 aa21.99■■□□□ 1.11
COPE-209ENST00000599964 hCG_1984214I3L0E3 225 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 FMNL1O95466 1100 aaPredicted RBP21.98■■□□□ 1.11
COPE-209ENST00000599964 MAPK4P31152 587 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 ARHGEF6Q15052 776 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 NCAPG2Q86XI2 1143 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 ZNF713Q8N859 430 aaPredicted RBP21.98■■□□□ 1.11
COPE-209ENST00000599964 PHKBQ93100 1093 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 AGBL1Q96MI9 1066 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 MOV10L1Q9BXT6 1211 aaKnown RBP21.98■■□□□ 1.11
COPE-209ENST00000599964 R3HDMLQ9H3Y0 253 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 FBXO40Q9UH90 709 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 ZNF536O15090 1300 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 ABCB11O95342 1321 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 MYH6P13533 1939 aa21.98■■□□□ 1.11
COPE-209ENST00000599964 ALAS1P13196 640 aa21.97■■□□□ 1.11
COPE-209ENST00000599964 Q3C1V9 767 aa21.97■■□□□ 1.11
COPE-209ENST00000599964 USH1GQ495M9 461 aa21.97■■□□□ 1.11
COPE-209ENST00000599964 CHST13Q8NET6 341 aa21.97■■□□□ 1.11
COPE-209ENST00000599964 WASF1Q92558 559 aa21.97■■□□□ 1.11
COPE-209ENST00000599964 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.97■■□□□ 1.11
COPE-209ENST00000599964 PCDHA1Q9Y5I3 950 aa21.97■■□□□ 1.11
COPE-209ENST00000599964 STK36Q9NRP7 1315 aa21.97■■□□□ 1.11
COPE-209ENST00000599964 FKTNO75072 461 aa21.96■■□□□ 1.11
COPE-209ENST00000599964 DEXIO95424 95 aa21.96■■□□□ 1.11
COPE-209ENST00000599964 WDR78Q5VTH9 848 aa21.96■■□□□ 1.11
COPE-209ENST00000599964 ERO1AQ96HE7 468 aa21.96■■□□□ 1.11
COPE-209ENST00000599964 MRPL11Q9Y3B7 192 aaKnown RBP21.96■■□□□ 1.11
COPE-209ENST00000599964 CEP350Q5VT06 3117 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 hCG_1642624A0A1W2PR95 340 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 PEX10O60683 326 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 SCG2P13521 617 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 ERCC3P19447 782 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 HMGN5P82970 282 aaKnown RBP21.95■■□□□ 1.1
COPE-209ENST00000599964 LACTBP83111 547 aaPredicted RBP21.95■■□□□ 1.1
COPE-209ENST00000599964 BECN1Q14457 450 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 PFKFB3Q16875 520 aaPredicted RBP21.95■■□□□ 1.1
COPE-209ENST00000599964 HEATR3Q7Z4Q2 680 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 NSUN7Q8NE18 718 aaKnown RBP21.95■■□□□ 1.1
COPE-209ENST00000599964 CCDC12Q8WUD4 166 aaPredicted RBP21.95■■□□□ 1.1
COPE-209ENST00000599964 TRERF1Q96PN7 1200 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 ACAD9Q9H845 621 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 HOMER2Q9NSB8 354 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 RNF146Q9NTX7 359 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 ORC3Q9UBD5 711 aaPredicted RBP21.95■■□□□ 1.1
COPE-209ENST00000599964 IVNS1ABPQ9Y6Y0 642 aa21.95■■□□□ 1.1
COPE-209ENST00000599964 BAZ2BQ9UIF8 2168 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms