RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 PIBF1Q8WXW3 757 aa25.3■■□□□ 1.64
LTBP4-224ENST00000599016 BRI3BPQ8WY22 251 aa25.3■■□□□ 1.64
LTBP4-224ENST00000599016 PNMA3Q9UL41 463 aa25.3■■□□□ 1.64
LTBP4-224ENST00000599016 SLC45A1Q9Y2W3 748 aa25.3■■□□□ 1.64
LTBP4-224ENST00000599016 RLFQ13129 1914 aa25.29■■□□□ 1.64
LTBP4-224ENST00000599016 TESPA1A2RU30 521 aaPredicted RBP25.29■■□□□ 1.64
LTBP4-224ENST00000599016 DSG3P32926 999 aa25.29■■□□□ 1.64
LTBP4-224ENST00000599016 SREBF2Q12772 1141 aa25.29■■□□□ 1.64
LTBP4-224ENST00000599016 SLC35G1Q2M3R5 365 aa25.29■■□□□ 1.64
LTBP4-224ENST00000599016 HOMER1Q86YM7 354 aa25.29■■□□□ 1.64
LTBP4-224ENST00000599016 PIGSQ96S52 555 aa25.29■■□□□ 1.64
LTBP4-224ENST00000599016 ZBED4O75132 1171 aa25.28■■□□□ 1.64
LTBP4-224ENST00000599016 NOGQ13253 232 aa25.28■■□□□ 1.64
LTBP4-224ENST00000599016 CDC37Q16543 378 aaPredicted RBP25.28■■□□□ 1.64
LTBP4-224ENST00000599016 CWC22Q9HCG8 908 aaKnown RBP25.28■■□□□ 1.64
LTBP4-224ENST00000599016 PNMA6FA0A0J9YX94 578 aa25.27■■□□□ 1.64
LTBP4-224ENST00000599016 BTBD19C9JJ37 291 aa25.27■■□□□ 1.64
LTBP4-224ENST00000599016 ZBTB5O15062 677 aa25.27■■□□□ 1.64
LTBP4-224ENST00000599016 DTNBO60941 627 aa25.27■■□□□ 1.64
LTBP4-224ENST00000599016 OTUD7BQ6GQQ9 843 aa25.27■■□□□ 1.64
LTBP4-224ENST00000599016 MTMR8Q96EF0 704 aa25.27■■□□□ 1.64
LTBP4-224ENST00000599016 ASCC2Q9H1I8 757 aaPredicted RBP25.27■■□□□ 1.64
LTBP4-224ENST00000599016 hCG_1642624A0A1W2PR95 340 aa25.26■■□□□ 1.63
LTBP4-224ENST00000599016 PDHXO00330 501 aa25.26■■□□□ 1.63
LTBP4-224ENST00000599016 SCG2P13521 617 aa25.26■■□□□ 1.63
LTBP4-224ENST00000599016 FDPSP14324 419 aaKnown RBP25.26■■□□□ 1.63
LTBP4-224ENST00000599016 TRAF1Q13077 416 aa25.26■■□□□ 1.63
LTBP4-224ENST00000599016 PFKFB3Q16875 520 aaPredicted RBP25.26■■□□□ 1.63
LTBP4-224ENST00000599016 ATG4CQ96DT6 458 aa25.26■■□□□ 1.63
LTBP4-224ENST00000599016 RANBP17Q9H2T7 1088 aaKnown RBP25.26■■□□□ 1.63
LTBP4-224ENST00000599016 hCG_1984214I3L0E3 225 aa25.25■■□□□ 1.63
LTBP4-224ENST00000599016 XBP1P17861 261 aa25.25■■□□□ 1.63
LTBP4-224ENST00000599016 QRICH1Q2TAL8 776 aa25.25■■□□□ 1.63
LTBP4-224ENST00000599016 REM2Q8IYK8 340 aaPredicted RBP25.25■■□□□ 1.63
LTBP4-224ENST00000599016 ZNF713Q8N859 430 aaPredicted RBP25.25■■□□□ 1.63
LTBP4-224ENST00000599016 P2RX7Q99572 595 aaKnown RBP25.25■■□□□ 1.63
LTBP4-224ENST00000599016 ALG1Q9BT22 464 aa25.25■■□□□ 1.63
LTBP4-224ENST00000599016 ZCCHC17Q9NP64 241 aaKnown RBP25.25■■□□□ 1.63
LTBP4-224ENST00000599016 PNMA2Q9UL42 364 aa25.25■■□□□ 1.63
LTBP4-224ENST00000599016 COL11A1P12107 1806 aaPredicted RBP25.25■■□□□ 1.63
LTBP4-224ENST00000599016 SPDYE16A6NNV3 312 aaPredicted RBP25.24■■□□□ 1.63
LTBP4-224ENST00000599016 VWA5AO00534 786 aa25.24■■□□□ 1.63
LTBP4-224ENST00000599016 PDCP20941 246 aa25.24■■□□□ 1.63
LTBP4-224ENST00000599016 KIF23Q02241 960 aaPredicted RBP25.24■■□□□ 1.63
LTBP4-224ENST00000599016 PKN1Q16512 942 aa25.24■■□□□ 1.63
LTBP4-224ENST00000599016 GTF3C2Q8WUA4 911 aaPredicted RBP25.24■■□□□ 1.63
LTBP4-224ENST00000599016 SLC38A10Q9HBR0 1119 aa25.24■■□□□ 1.63
LTBP4-224ENST00000599016 SNAP25P60880 206 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 HERVK_113P62684 666 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 CCDC174Q6PII3 467 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 FBXO11Q86XK2 927 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 FAM43AQ8N2R8 423 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 MB21D1Q8N884 522 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 PTPN18Q99952 460 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 AMNQ9BXJ7 453 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 ADAMTS5Q9UNA0 930 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 CASP8AP2Q9UKL3 1982 aa25.23■■□□□ 1.63
LTBP4-224ENST00000599016 TM4SF4P48230 202 aa25.22■■□□□ 1.63
LTBP4-224ENST00000599016 TRIM29Q14134 588 aa25.22■■□□□ 1.63
LTBP4-224ENST00000599016 LARP1BQ659C4 914 aaKnown RBP25.22■■□□□ 1.63
LTBP4-224ENST00000599016 LBX2Q6XYB7 198 aa25.22■■□□□ 1.63
LTBP4-224ENST00000599016 HEATR3Q7Z4Q2 680 aa25.22■■□□□ 1.63
LTBP4-224ENST00000599016 PARK7Q99497 189 aaKnown RBP25.22■■□□□ 1.63
LTBP4-224ENST00000599016 TNRC18O15417 2968 aaPredicted RBP25.22■■□□□ 1.63
LTBP4-224ENST00000599016 A0A0G2JMZ2 1700 aa25.21■■□□□ 1.63
LTBP4-224ENST00000599016 CA12O43570 354 aa25.21■■□□□ 1.63
LTBP4-224ENST00000599016 IFNL1Q8IU54 200 aa25.21■■□□□ 1.63
LTBP4-224ENST00000599016 SMCR8Q8TEV9 937 aaPredicted RBP25.21■■□□□ 1.63
LTBP4-224ENST00000599016 CCDC12Q8WUD4 166 aaPredicted RBP25.21■■□□□ 1.63
LTBP4-224ENST00000599016 C8orf76Q96K31 380 aa25.21■■□□□ 1.63
LTBP4-224ENST00000599016 SH3GLB2Q9NR46 395 aa25.21■■□□□ 1.63
LTBP4-224ENST00000599016 IGF2BP3O00425 579 aaKnown RBP eCLIP25.2■■□□□ 1.62
LTBP4-224ENST00000599016 ICAM1P05362 532 aa25.2■■□□□ 1.62
LTBP4-224ENST00000599016 PDIA4P13667 645 aaKnown RBP25.2■■□□□ 1.62
LTBP4-224ENST00000599016 OAZ1P54368 228 aa25.2■■□□□ 1.62
LTBP4-224ENST00000599016 SOX10P56693 466 aa25.2■■□□□ 1.62
LTBP4-224ENST00000599016 WWC2Q6AWC2 1192 aa25.2■■□□□ 1.62
LTBP4-224ENST00000599016 FAM177A1Q8N128 213 aaPredicted RBP25.2■■□□□ 1.62
LTBP4-224ENST00000599016 CCDC148Q8NFR7 591 aa25.2■■□□□ 1.62
LTBP4-224ENST00000599016 GPKOWQ92917 476 aaPredicted RBP eCLIP25.2■■□□□ 1.62
LTBP4-224ENST00000599016 BARHL2Q9NY43 387 aa25.2■■□□□ 1.62
LTBP4-224ENST00000599016 NAPAP54920 295 aa25.19■■□□□ 1.62
LTBP4-224ENST00000599016 PPP1R18Q6NYC8 613 aa25.19■■□□□ 1.62
LTBP4-224ENST00000599016 CPXCR1Q8N123 301 aa25.19■■□□□ 1.62
LTBP4-224ENST00000599016 AIFM3Q96NN9 605 aa25.19■■□□□ 1.62
LTBP4-224ENST00000599016 RAVER2Q9HCJ3 691 aaKnown RBP25.19■■□□□ 1.62
LTBP4-224ENST00000599016 CCPG1Q9ULG6 757 aa25.19■■□□□ 1.62
LTBP4-224ENST00000599016 PCDHA1Q9Y5I3 950 aa25.19■■□□□ 1.62
LTBP4-224ENST00000599016 H3BQV1 296 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 CYP2C8P10632 490 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 GCLCP48506 637 aaPredicted RBP25.18■■□□□ 1.62
LTBP4-224ENST00000599016 FOSBP53539 338 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 TAF1CQ15572 869 aaPredicted RBP25.18■■□□□ 1.62
LTBP4-224ENST00000599016 USH1GQ495M9 461 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 RGS22Q8NE09 1264 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 REPS2Q8NFH8 660 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 COA7Q96BR5 231 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 PAGR1Q9BTK6 254 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 VPS54Q9P1Q0 977 aa25.18■■□□□ 1.62
LTBP4-224ENST00000599016 RABGAP1Q9Y3P9 1069 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms