RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 ACDQ96AP0 544 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 GPR101Q96P66 508 aaPredicted RBP12.62□□□□□ -0.39
SMG9-207ENST00000598860 DBNDD1Q9H9R9 158 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 PARP2Q9UGN5 583 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 MYH7P12883 1935 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 DUOX1Q9NRD9 1551 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 AKAP11Q9UKA4 1901 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 ECE2O60344 883 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 LORP23490 312 aaPredicted RBP12.61□□□□□ -0.39
SMG9-207ENST00000598860 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
SMG9-207ENST00000598860 TFCP2Q12800 502 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 ORC1Q13415 861 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 PUM3Q15397 648 aaKnown RBP12.61□□□□□ -0.39
SMG9-207ENST00000598860 TSNAXIP1Q2TAA8 658 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 TNNI3KQ59H18 835 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 LYPD4Q6UWN0 246 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 RAB44Q7Z6P3 723 aaPredicted RBP12.61□□□□□ -0.39
SMG9-207ENST00000598860 VGLL2Q8N8G2 317 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 CSRNP1Q96S65 589 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 OXCT2Q9BYC2 517 aaPredicted RBP12.61□□□□□ -0.39
SMG9-207ENST00000598860 RNF19AQ9NV58 838 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 GPRC5DQ9NZD1 345 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 FPGT-TNNI3KV9GXZ4 949 aa12.61□□□□□ -0.39
SMG9-207ENST00000598860 PSME4Q14997 1843 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 IFIT2P09913 472 aaKnown RBP12.6□□□□□ -0.39
SMG9-207ENST00000598860 SLC5A1P13866 664 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 ATP2B3Q16720 1220 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 ALG1LQ6GMV1 187 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 USP50Q70EL3 339 aaPredicted RBP12.6□□□□□ -0.39
SMG9-207ENST00000598860 CMTR1Q8N1G2 835 aaKnown RBP12.6□□□□□ -0.39
SMG9-207ENST00000598860 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 ADARB2Q9NS39 739 aaKnown RBP12.6□□□□□ -0.39
SMG9-207ENST00000598860 LEMD3Q9Y2U8 911 aa12.6□□□□□ -0.39
SMG9-207ENST00000598860 H7C1D1 291 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 PSMD14O00487 310 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 IFIT1P09914 478 aaKnown RBP12.59□□□□□ -0.39
SMG9-207ENST00000598860 KCNJ4P48050 445 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 PCBP4P57723 403 aaKnown RBP12.59□□□□□ -0.39
SMG9-207ENST00000598860 HTRA3P83110 453 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 ZNF385CQ66K41 422 aaPredicted RBP12.59□□□□□ -0.39
SMG9-207ENST00000598860 AACSQ86V21 672 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 LPIN2Q92539 896 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 KCNQ5Q9NR82 932 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 CNOT7Q9UIV1 285 aaKnown RBP12.59□□□□□ -0.39
SMG9-207ENST00000598860 AOX1Q06278 1338 aa12.59□□□□□ -0.39
SMG9-207ENST00000598860 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
SMG9-207ENST00000598860 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
SMG9-207ENST00000598860 SMARCA5O60264 1052 aaPredicted RBP12.58□□□□□ -0.4
SMG9-207ENST00000598860 CELA2BP08218 269 aaPredicted RBP12.58□□□□□ -0.4
SMG9-207ENST00000598860 ARAFP10398 606 aa12.58□□□□□ -0.4
SMG9-207ENST00000598860 FGFR2P21802 821 aa12.58□□□□□ -0.4
SMG9-207ENST00000598860 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
SMG9-207ENST00000598860 CNTROBQ8N137 903 aa12.58□□□□□ -0.4
SMG9-207ENST00000598860 DPF2Q92785 391 aa12.58□□□□□ -0.4
SMG9-207ENST00000598860 GSX2Q9BZM3 304 aa12.58□□□□□ -0.4
SMG9-207ENST00000598860 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
SMG9-207ENST00000598860 EIF1AYO14602 144 aaKnown RBP12.57□□□□□ -0.4
SMG9-207ENST00000598860 VIL1P09327 827 aaKnown RBP12.57□□□□□ -0.4
SMG9-207ENST00000598860 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
SMG9-207ENST00000598860 DAB2P98082 770 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 CCINQ13939 588 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 TRIP4Q15650 581 aaPredicted RBP12.57□□□□□ -0.4
SMG9-207ENST00000598860 ZNF468Q5VIY5 522 aaPredicted RBP12.57□□□□□ -0.4
SMG9-207ENST00000598860 C15orf52Q6ZUT6 534 aaKnown RBP12.57□□□□□ -0.4
SMG9-207ENST00000598860 PODNQ7Z5L7 613 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 SVOPQ8N4V2 548 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 BHMTQ93088 406 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 EAF2Q96CJ1 260 aaPredicted RBP12.57□□□□□ -0.4
SMG9-207ENST00000598860 BACH2Q9BYV9 841 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
SMG9-207ENST00000598860 DOCK2Q92608 1830 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 ZNF804BA4D1E1 1349 aa12.57□□□□□ -0.4
SMG9-207ENST00000598860 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 ERC2O15083 957 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 TAF5LO75529 589 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 MX1P20591 662 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 PSMD2Q13200 908 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 CCDC158Q5M9N0 1113 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 GOLGA6L1Q8N7Z2 621 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 FBF1Q8TES7 1133 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 DNAJC25Q9H1X3 360 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 AVENQ9NQS1 362 aaPredicted RBP12.56□□□□□ -0.4
SMG9-207ENST00000598860 KLF15Q9UIH9 416 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 DBNLQ9UJU6 430 aaKnown RBP12.56□□□□□ -0.4
SMG9-207ENST00000598860 FNDC3AQ9Y2H6 1198 aaKnown RBP12.56□□□□□ -0.4
SMG9-207ENST00000598860 KCNMB2Q9Y691 235 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 SALL3Q9BXA9 1300 aa12.56□□□□□ -0.4
SMG9-207ENST00000598860 MYO5AQ9Y4I1 1855 aaKnown RBP12.55□□□□□ -0.4
SMG9-207ENST00000598860 BCRP11274 1271 aa12.55□□□□□ -0.4
SMG9-207ENST00000598860 ADH6P28332 368 aa12.55□□□□□ -0.4
SMG9-207ENST00000598860 CAVIN4Q5BKX8 364 aa12.55□□□□□ -0.4
SMG9-207ENST00000598860 GORABQ5T7V8 394 aa12.55□□□□□ -0.4
SMG9-207ENST00000598860 PNMA5Q96PV4 448 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms