RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NAPBQ9H115 298 aa20.22■□□□□ 0.83
PNKP-210ENST00000597965 EPB41L4AQ9HCS5 686 aaPredicted RBP20.22■□□□□ 0.83
PNKP-210ENST00000597965 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.21■□□□□ 0.83
PNKP-210ENST00000597965 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.21■□□□□ 0.83
PNKP-210ENST00000597965 PRDM1O75626 825 aa20.21■□□□□ 0.83
PNKP-210ENST00000597965 TIMP1P01033 207 aa20.21■□□□□ 0.83
PNKP-210ENST00000597965 CCDC144BQ3MJ40 725 aa20.21■□□□□ 0.83
PNKP-210ENST00000597965 C20orf194Q5TEA3 1177 aa20.21■□□□□ 0.83
PNKP-210ENST00000597965 SLFN13Q68D06 897 aa20.21■□□□□ 0.83
PNKP-210ENST00000597965 VTI1AQ96AJ9 217 aa20.21■□□□□ 0.83
PNKP-210ENST00000597965 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
PNKP-210ENST00000597965 ISY1Q9ULR0 285 aaKnown RBP20.21■□□□□ 0.83
PNKP-210ENST00000597965 A0A0U1RQG5 324 aaPredicted RBP20.2■□□□□ 0.82
PNKP-210ENST00000597965 TLR3O15455 904 aaKnown RBP20.2■□□□□ 0.82
PNKP-210ENST00000597965 ASGR1P07306 291 aa20.2■□□□□ 0.82
PNKP-210ENST00000597965 ITGB8P26012 769 aa20.2■□□□□ 0.82
PNKP-210ENST00000597965 GJA9P57773 515 aa20.2■□□□□ 0.82
PNKP-210ENST00000597965 IKQ13123 557 aaPredicted RBP20.2■□□□□ 0.82
PNKP-210ENST00000597965 TKFCQ3LXA3 575 aa20.2■□□□□ 0.82
PNKP-210ENST00000597965 GNASQ5JWF2 1037 aa20.2■□□□□ 0.82
PNKP-210ENST00000597965 CCSAPQ6IQ19 270 aaPredicted RBP20.2■□□□□ 0.82
PNKP-210ENST00000597965 ARMCX2Q7L311 632 aa20.2■□□□□ 0.82
PNKP-210ENST00000597965 LRRC47Q8N1G4 583 aaKnown RBP20.2■□□□□ 0.82
PNKP-210ENST00000597965 LENG1Q96BZ8 264 aaPredicted RBP20.2■□□□□ 0.82
PNKP-210ENST00000597965 GMCL1Q96IK5 515 aa20.2■□□□□ 0.82
PNKP-210ENST00000597965 COL25A1Q9BXS0 654 aaPredicted RBP20.2■□□□□ 0.82
PNKP-210ENST00000597965 SEZ6LQ9BYH1 1024 aa20.2■□□□□ 0.82
PNKP-210ENST00000597965 UPF3AQ9H1J1 476 aaKnown RBP20.2■□□□□ 0.82
PNKP-210ENST00000597965 ASB14A6NK59 587 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 M0R2C6 588 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 FOSL2P15408 326 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 SLC1A4P43007 532 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 TFAP4Q01664 338 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 PPIGQ13427 754 aaKnown RBP eCLIP20.19■□□□□ 0.825e-7■■■■■ 32
PNKP-210ENST00000597965 MFSD5Q6N075 450 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 CCDC129Q6ZRS4 1044 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 TMEM199Q8N511 208 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 STAG1Q8WVM7 1258 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 FSD1Q9BTV5 496 aa20.19■□□□□ 0.82
PNKP-210ENST00000597965 TMEM232C9JQI7 657 aa20.18■□□□□ 0.82
PNKP-210ENST00000597965 PLA2G6O60733 806 aa20.18■□□□□ 0.82
PNKP-210ENST00000597965 PPARAQ07869 468 aa20.18■□□□□ 0.82
PNKP-210ENST00000597965 TSHZ3Q63HK5 1081 aa20.18■□□□□ 0.82
PNKP-210ENST00000597965 CCDC144CPQ8IYA2 1237 aa20.18■□□□□ 0.82
PNKP-210ENST00000597965 TTYH1Q9H313 450 aaPredicted RBP20.18■□□□□ 0.82
PNKP-210ENST00000597965 ZBTB47Q9UFB7 747 aaPredicted RBP20.18■□□□□ 0.82
PNKP-210ENST00000597965 TBX21Q9UL17 535 aa20.18■□□□□ 0.82
PNKP-210ENST00000597965 ARVCFO00192 962 aa20.17■□□□□ 0.82
PNKP-210ENST00000597965 CABYRO75952 493 aa20.17■□□□□ 0.82
PNKP-210ENST00000597965 CDK7P50613 346 aa20.17■□□□□ 0.82
PNKP-210ENST00000597965 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
PNKP-210ENST00000597965 CDH23Q9H251 3354 aa20.16■□□□□ 0.82
PNKP-210ENST00000597965 ZEB2O60315 1214 aa20.16■□□□□ 0.82
PNKP-210ENST00000597965 EPHB4P54760 987 aa20.16■□□□□ 0.82
PNKP-210ENST00000597965 NKX3-2P78367 333 aa20.16■□□□□ 0.82
PNKP-210ENST00000597965 TNFAIP2Q03169 654 aa20.16■□□□□ 0.82
PNKP-210ENST00000597965 PSRC1Q6PGN9 363 aaPredicted RBP20.16■□□□□ 0.82
PNKP-210ENST00000597965 NOL8Q76FK4 1167 aaKnown RBP20.16■□□□□ 0.82
PNKP-210ENST00000597965 FAM133AQ8N9E0 248 aa20.16■□□□□ 0.82
PNKP-210ENST00000597965 MYLIPQ8WY64 445 aa20.16■□□□□ 0.82
PNKP-210ENST00000597965 SYMPKQ92797 1274 aaKnown RBP20.16■□□□□ 0.82
PNKP-210ENST00000597965 STX8Q9UNK0 236 aa20.16■□□□□ 0.82
PNKP-210ENST00000597965 MCM3APO60318 1980 aa20.15■□□□□ 0.82
PNKP-210ENST00000597965 TSPY2A6NKD2 308 aa20.15■□□□□ 0.82
PNKP-210ENST00000597965 DNAJB2P25686 324 aa20.15■□□□□ 0.82
PNKP-210ENST00000597965 ZMYM1Q5SVZ6 1142 aa20.15■□□□□ 0.82
PNKP-210ENST00000597965 PI4K2BQ8TCG2 481 aa20.15■□□□□ 0.82
PNKP-210ENST00000597965 TRERF1Q96PN7 1200 aa20.15■□□□□ 0.82
PNKP-210ENST00000597965 AP5M1Q9H0R1 490 aa20.15■□□□□ 0.82
PNKP-210ENST00000597965 MTIF3Q9H2K0 278 aaKnown RBP20.15■□□□□ 0.82
PNKP-210ENST00000597965 RNF146Q9NTX7 359 aa20.15■□□□□ 0.82
PNKP-210ENST00000597965 MYADML2A6NDP7 307 aa20.14■□□□□ 0.81
PNKP-210ENST00000597965 MX1P20591 662 aa20.14■□□□□ 0.81
PNKP-210ENST00000597965 RCSD1Q6JBY9 416 aa20.14■□□□□ 0.81
PNKP-210ENST00000597965 FGD4Q96M96 766 aa20.14■□□□□ 0.81
PNKP-210ENST00000597965 A1CFQ9NQ94 594 aaKnown RBP20.14■□□□□ 0.81
PNKP-210ENST00000597965 Q9Y3F1 56 aa20.14■□□□□ 0.81
PNKP-210ENST00000597965 MCCP23508 829 aa20.13■□□□□ 0.81
PNKP-210ENST00000597965 CNTN2Q02246 1040 aa20.13■□□□□ 0.81
PNKP-210ENST00000597965 FAM126BQ8IXS8 530 aa20.13■□□□□ 0.81
PNKP-210ENST00000597965 TIFAQ96CG3 184 aa20.13■□□□□ 0.81
PNKP-210ENST00000597965 SEC62Q99442 399 aaKnown RBP20.13■□□□□ 0.81
PNKP-210ENST00000597965 KATNBL1Q9H079 304 aa20.13■□□□□ 0.81
PNKP-210ENST00000597965 PNMA2Q9UL42 364 aa20.13■□□□□ 0.81
PNKP-210ENST00000597965 ZNF536O15090 1300 aa20.12■□□□□ 0.81
PNKP-210ENST00000597965 ALAS1P13196 640 aa20.12■□□□□ 0.81
PNKP-210ENST00000597965 IQSEC1Q6DN90 963 aa20.12■□□□□ 0.81
PNKP-210ENST00000597965 TICAM2Q86XR7 235 aa20.12■□□□□ 0.81
PNKP-210ENST00000597965 AGBL1Q96MI9 1066 aa20.12■□□□□ 0.81
PNKP-210ENST00000597965 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.12■□□□□ 0.81
PNKP-210ENST00000597965 ZNF576Q9H609 170 aa20.12■□□□□ 0.81
PNKP-210ENST00000597965 EYSQ5T1H1 3165 aa20.11■□□□□ 0.81
PNKP-210ENST00000597965 LOC102724159A0A0B4J2E5 919 aa20.11■□□□□ 0.81
PNKP-210ENST00000597965 ADCY6O43306 1168 aa20.11■□□□□ 0.81
PNKP-210ENST00000597965 PWP2Q15269 919 aaKnown RBP20.11■□□□□ 0.81
PNKP-210ENST00000597965 FSCN1Q16658 493 aaKnown RBP20.11■□□□□ 0.81
PNKP-210ENST00000597965 TMEM240Q5SV17 173 aa20.11■□□□□ 0.81
PNKP-210ENST00000597965 TLK2Q86UE8 772 aa20.11■□□□□ 0.81
PNKP-210ENST00000597965 ADD3Q9UEY8 706 aaKnown RBP20.11■□□□□ 0.81
PNKP-210ENST00000597965 ANAPC4Q9UJX5 808 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms