RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 CLIP2Q9UDT6 1046 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.25
PDE4C-210ENST00000597297 IRF6O14896 467 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 TRPA1O75762 1119 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 PDHBP11177 359 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 TOB1P50616 345 aaPredicted RBP13.51□□□□□ -0.25
PDE4C-210ENST00000597297 NLRP5P59047 1200 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 JAG1P78504 1218 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 FAM160A1Q05DH4 1040 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 SCYL3Q8IZE3 742 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 ENGASEQ8NFI3 743 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 TNFRSF25Q93038 417 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 PANK2Q9BZ23 570 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 TNMDQ9H2S6 317 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 RNF186Q9NXI6 227 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 TSKSQ9UJT2 592 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 THSD7BQ9C0I4 1608 aa13.51□□□□□ -0.25
PDE4C-210ENST00000597297 MANSC4A6NHS7 340 aaPredicted RBP13.5□□□□□ -0.25
PDE4C-210ENST00000597297 PTPRAP18433 802 aa13.5□□□□□ -0.25
PDE4C-210ENST00000597297 CALML3P27482 149 aa13.5□□□□□ -0.25
PDE4C-210ENST00000597297 CAP2P40123 477 aa13.5□□□□□ -0.25
PDE4C-210ENST00000597297 PPATQ06203 517 aa13.5□□□□□ -0.25
PDE4C-210ENST00000597297 AXDND1Q5T1B0 1012 aaPredicted RBP13.5□□□□□ -0.25
PDE4C-210ENST00000597297 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
PDE4C-210ENST00000597297 CCDC84Q86UT8 332 aaPredicted RBP13.5□□□□□ -0.25
PDE4C-210ENST00000597297 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
PDE4C-210ENST00000597297 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
PDE4C-210ENST00000597297 GPKOWQ92917 476 aaPredicted RBP eCLIP13.5□□□□□ -0.25
PDE4C-210ENST00000597297 PTPN18Q99952 460 aa13.5□□□□□ -0.25
PDE4C-210ENST00000597297 FUCA2Q9BTY2 467 aa13.5□□□□□ -0.25
PDE4C-210ENST00000597297 BEGAINQ9BUH8 593 aa13.5□□□□□ -0.25
PDE4C-210ENST00000597297 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
PDE4C-210ENST00000597297 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 INHBEP58166 350 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 PPIL2Q13356 520 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 SNW1Q13573 536 aaKnown RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 CAMK4Q16566 473 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 SHROOM1Q2M3G4 852 aaPredicted RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 TMEM179Q6ZVK1 233 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 CCDC148Q8NFR7 591 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 RRP36Q96EU6 259 aaKnown RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 NYAP2Q9P242 653 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 NOL7Q9UMY1 257 aaKnown RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 ZHX2Q9Y6X8 837 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 FRMPD2Q68DX3 1309 aaPredicted RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 A0A1B0GVL5 298 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 FAM205CA6NFA0 338 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 STXBP3O00186 592 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 IGF2BP3O00425 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 KINO60870 393 aaKnown RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 CUTAO60888 179 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 CMA1P23946 247 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 ABCB5Q2M3G0 1257 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 EARS2Q5JPH6 523 aaKnown RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 IFNL1Q8IU54 200 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 BLIDQ8IZY5 108 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 FMR1NBQ8N0W7 255 aaPredicted RBP13.49□□□□□ -0.25
PDE4C-210ENST00000597297 BRI3BPQ8WY22 251 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 MKL1Q969V6 931 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 CPVLQ9H3G5 476 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 RIOX1Q9H6W3 641 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 KANSL2Q9H9L4 492 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 PICK1Q9NRD5 415 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 BARHL2Q9NY43 387 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 PCDHA4Q9UN74 947 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 AFG3L2Q9Y4W6 797 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 PCDHB6Q9Y5E3 794 aa13.49□□□□□ -0.25
PDE4C-210ENST00000597297 TRIM75PA6NK02 468 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 CTAGE5O15320 804 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 GDF11O95390 407 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 HSPA8P11142 646 aaKnown RBP13.48□□□□□ -0.25
PDE4C-210ENST00000597297 NDUFA8P51970 172 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 GTF2A2P52657 109 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 LBX1P52954 281 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 ZNF543Q08ER8 600 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 SREBF2Q12772 1141 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 GALNT17Q6IS24 598 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 TYW1BQ6NUM6 668 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
PDE4C-210ENST00000597297 SEC63Q9UGP8 760 aaKnown RBP13.48□□□□□ -0.25
PDE4C-210ENST00000597297 MORC2Q9Y6X9 1032 aaPredicted RBP13.48□□□□□ -0.25
PDE4C-210ENST00000597297 CCL15-CCL14A0A0B4J2E2 113 aa13.47□□□□□ -0.25
PDE4C-210ENST00000597297 TBC1D8O95759 1140 aa13.47□□□□□ -0.25
PDE4C-210ENST00000597297 CCDC192P0DO97 292 aa13.47□□□□□ -0.25
PDE4C-210ENST00000597297 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
PDE4C-210ENST00000597297 PFKFB1P16118 471 aa13.47□□□□□ -0.25
PDE4C-210ENST00000597297 ATP2B1P20020 1258 aa13.47□□□□□ -0.25
PDE4C-210ENST00000597297 CTCFP49711 727 aaPredicted RBP13.47□□□□□ -0.25
PDE4C-210ENST00000597297 ICA1Q05084 483 aa13.47□□□□□ -0.25
PDE4C-210ENST00000597297 SEPT2Q15019 361 aa13.47□□□□□ -0.25
PDE4C-210ENST00000597297 CCL15Q16663 113 aa13.47□□□□□ -0.25
PDE4C-210ENST00000597297 NOM1Q5C9Z4 860 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms