RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 MTMR2Q13614 643 aa13.25□□□□□ -0.29
SH2D3A-206ENST00000597254 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
SH2D3A-206ENST00000597254 FAM83BQ5T0W9 1011 aa13.25□□□□□ -0.29
SH2D3A-206ENST00000597254 ADGRF4Q8IZF3 695 aa13.25□□□□□ -0.29
SH2D3A-206ENST00000597254 RGS22Q8NE09 1264 aa13.25□□□□□ -0.29
SH2D3A-206ENST00000597254 JMJD4Q9H9V9 463 aa13.25□□□□□ -0.29
SH2D3A-206ENST00000597254 GJB4Q9NTQ9 266 aa13.25□□□□□ -0.29
SH2D3A-206ENST00000597254 MYH6P13533 1939 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 WDR46O15213 610 aaKnown RBP13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 PLA2G6O60733 806 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 ZSCAN22P10073 491 aaPredicted RBP13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 SCG2P13521 617 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 GUCY1B3Q02153 619 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 KIF22Q14807 665 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 SH3D19Q5HYK7 790 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 FBXO18Q8NFZ0 1043 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 CHURC1Q8WUH1 139 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 MTMR8Q96EF0 704 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 RRP36Q96EU6 259 aaKnown RBP13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 C12orf42Q96LP6 360 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 PIGSQ96S52 555 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 PTPN22Q9Y2R2 807 aa13.24□□□□□ -0.29
SH2D3A-206ENST00000597254 KIAA0100Q14667 2235 aaKnown RBP13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 CXCL11O14625 94 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 TLR2O60603 784 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 HMGCS2P54868 508 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 TRIM29Q14134 588 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 SYDE2Q5VT97 1194 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 KRT40Q6A162 431 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 FAM160B2Q86V87 743 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 TMOD4Q9NZQ9 345 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 KCNH4Q9UQ05 1017 aa13.23□□□□□ -0.29
SH2D3A-206ENST00000597254 PNMA6FA0A0J9YX94 578 aa13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 XBP1P17861 261 aa13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 STAT2P52630 851 aa13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 ANKRD23Q86SG2 305 aa13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 TNPO1Q92973 898 aaKnown RBP13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 SHISA4Q96DD7 197 aa13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 RPAP3Q9H6T3 665 aaPredicted RBP13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 VPS54Q9P1Q0 977 aa13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 PRR12Q9ULL5 1215 aa13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 BAZ2BQ9UIF8 2168 aaKnown RBP13.22□□□□□ -0.29
SH2D3A-206ENST00000597254 PDHXO00330 501 aa13.21□□□□□ -0.29
SH2D3A-206ENST00000597254 ZBTB5O15062 677 aa13.21□□□□□ -0.29
SH2D3A-206ENST00000597254 F13A1P00488 732 aa13.21□□□□□ -0.29
SH2D3A-206ENST00000597254 VCAM1P19320 739 aa13.21□□□□□ -0.29
SH2D3A-206ENST00000597254 SH3GLB2Q9NR46 395 aa13.21□□□□□ -0.29
SH2D3A-206ENST00000597254 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
SH2D3A-206ENST00000597254 KCNJ14Q9UNX9 436 aa13.21□□□□□ -0.29
SH2D3A-206ENST00000597254 A0A0G2JLL6 359 aaPredicted RBP13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 STXBP3O00186 592 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 MMP1P03956 469 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 NLRP5P59047 1200 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 SNAP25P60880 206 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 LACTBP83111 547 aaPredicted RBP13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 RESTQ13127 1097 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 CATSPERGQ6ZRH7 1159 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 HEATR3Q7Z4Q2 680 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 FERMT3Q86UX7 667 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 PRPF38AQ8NAV1 312 aaKnown RBP13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 PHF20Q9BVI0 1012 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 BARHL2Q9NY43 387 aa13.2□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 hCG_1984214I3L0E3 225 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 CAP1Q01518 475 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 SAFBQ15424 915 aaKnown RBP eCLIP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 ZNF713Q8N859 430 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 COA7Q96BR5 231 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 ARMC5Q96C12 935 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 SLF1Q9BQI6 1058 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms