RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 FGD4Q96M96 766 aa21.17■□□□□ 0.98
HOMER3-208ENST00000595756 ACAD9Q9H845 621 aa21.17■□□□□ 0.98
HOMER3-208ENST00000595756 ISY1Q9ULR0 285 aaKnown RBP21.17■□□□□ 0.98
HOMER3-208ENST00000595756 TACC3Q9Y6A5 838 aa21.17■□□□□ 0.98
HOMER3-208ENST00000595756 ZNF536O15090 1300 aa21.16■□□□□ 0.98
HOMER3-208ENST00000595756 CCDC171Q6TFL3 1326 aa21.16■□□□□ 0.98
HOMER3-208ENST00000595756 SYNRGQ9UMZ2 1314 aa21.16■□□□□ 0.98
HOMER3-208ENST00000595756 RANBP6O60518 1105 aaKnown RBP21.16■□□□□ 0.98
HOMER3-208ENST00000595756 NMT2O60551 498 aa21.16■□□□□ 0.98
HOMER3-208ENST00000595756 SNAI1O95863 264 aaPredicted RBP21.16■□□□□ 0.98
HOMER3-208ENST00000595756 SLC4A3P48751 1232 aa21.16■□□□□ 0.98
HOMER3-208ENST00000595756 IKQ13123 557 aaPredicted RBP21.16■□□□□ 0.98
HOMER3-208ENST00000595756 ZHX1Q9UKY1 873 aaPredicted RBP21.16■□□□□ 0.98
HOMER3-208ENST00000595756 LCTP09848 1927 aa21.16■□□□□ 0.98
HOMER3-208ENST00000595756 PGK1P00558 417 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 FGAP02671 866 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 HSPD1P10809 573 aaKnown RBP21.15■□□□□ 0.98
HOMER3-208ENST00000595756 MCCP23508 829 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 NMIQ13287 307 aaPredicted RBP21.15■□□□□ 0.98
HOMER3-208ENST00000595756 TKFCQ3LXA3 575 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 ZNF589Q86UQ0 364 aaPredicted RBP21.15■□□□□ 0.98
HOMER3-208ENST00000595756 FERMT2Q96AC1 680 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 LENG1Q96BZ8 264 aaPredicted RBP21.15■□□□□ 0.98
HOMER3-208ENST00000595756 TSEN34Q9BSV6 310 aaKnown RBP21.15■□□□□ 0.98
HOMER3-208ENST00000595756 OSBPL3Q9H4L5 887 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 INCENPQ9NQS7 918 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 PDLIM7Q9NR12 457 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 FAM184BQ9ULE4 1060 aa21.15■□□□□ 0.98
HOMER3-208ENST00000595756 A0A1W2PQ45 241 aaPredicted RBP21.14■□□□□ 0.97
HOMER3-208ENST00000595756 A0A1W2PQY0 241 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 RCSD1Q6JBY9 416 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 KCTD1Q719H9 257 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 DCAF4Q8WV16 495 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 ABHD16BQ9H3Z7 469 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 HOMER2Q9NSB8 354 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 RNF146Q9NTX7 359 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.14■□□□□ 0.97
HOMER3-208ENST00000595756 PPP4R2Q9NY27 417 aa21.14■□□□□ 0.97
HOMER3-208ENST00000595756 DUSP11O75319 330 aaKnown RBP21.13■□□□□ 0.97
HOMER3-208ENST00000595756 PCP11498 1178 aaKnown RBP21.13■□□□□ 0.97
HOMER3-208ENST00000595756 MFAP1P55081 439 aaKnown RBP21.13■□□□□ 0.97
HOMER3-208ENST00000595756 ACVR2BQ13705 512 aa21.13■□□□□ 0.97
HOMER3-208ENST00000595756 ARMCX2Q7L311 632 aa21.13■□□□□ 0.97
HOMER3-208ENST00000595756 RASGRP2Q7LDG7 609 aa21.13■□□□□ 0.97
HOMER3-208ENST00000595756 PLEKHM2Q8IWE5 1019 aa21.13■□□□□ 0.97
HOMER3-208ENST00000595756 FAM133AQ8N9E0 248 aa21.13■□□□□ 0.97
HOMER3-208ENST00000595756 A1CFQ9NQ94 594 aaKnown RBP21.13■□□□□ 0.97
HOMER3-208ENST00000595756 PRDM5Q9NQX1 630 aaPredicted RBP21.13■□□□□ 0.97
HOMER3-208ENST00000595756 TCP11L1Q9NUJ3 509 aa21.13■□□□□ 0.97
HOMER3-208ENST00000595756 MOXD2PA6NHM9 499 aa21.12■□□□□ 0.97
HOMER3-208ENST00000595756 CST5P28325 142 aaPredicted RBP21.12■□□□□ 0.97
HOMER3-208ENST00000595756 KLHDC9Q8NEP7 349 aa21.12■□□□□ 0.97
HOMER3-208ENST00000595756 RILPL2Q969X0 211 aa21.12■□□□□ 0.97
HOMER3-208ENST00000595756 AGBL1Q96MI9 1066 aa21.12■□□□□ 0.97
HOMER3-208ENST00000595756 TOMM22Q9NS69 142 aa21.12■□□□□ 0.97
HOMER3-208ENST00000595756 PRR12Q9ULL5 1215 aa21.12■□□□□ 0.97
HOMER3-208ENST00000595756 POTEB2H3BUK9 544 aa21.11■□□□□ 0.97
HOMER3-208ENST00000595756 CCDC96Q2M329 555 aa21.11■□□□□ 0.97
HOMER3-208ENST00000595756 CCDC144CPQ8IYA2 1237 aa21.11■□□□□ 0.97
HOMER3-208ENST00000595756 KATNBL1Q9H079 304 aa21.11■□□□□ 0.97
HOMER3-208ENST00000595756 CLTBP09497 229 aa21.1■□□□□ 0.97
HOMER3-208ENST00000595756 TOP1P11387 765 aaKnown RBP21.1■□□□□ 0.97
HOMER3-208ENST00000595756 ACLYP53396 1101 aa21.1■□□□□ 0.97
HOMER3-208ENST00000595756 CNTN2Q02246 1040 aa21.1■□□□□ 0.97
HOMER3-208ENST00000595756 TLE2Q04725 743 aa21.1■□□□□ 0.97
HOMER3-208ENST00000595756 RRP12Q5JTH9 1297 aaKnown RBP21.1■□□□□ 0.97
HOMER3-208ENST00000595756 CCSAPQ6IQ19 270 aaPredicted RBP21.1■□□□□ 0.97
HOMER3-208ENST00000595756 BTNL9Q6UXG8 535 aa21.1■□□□□ 0.97
HOMER3-208ENST00000595756 NUP133Q8WUM0 1156 aa21.1■□□□□ 0.97
HOMER3-208ENST00000595756 TRERF1Q96PN7 1200 aa21.1■□□□□ 0.97
HOMER3-208ENST00000595756 UPF3AQ9H1J1 476 aaKnown RBP21.1■□□□□ 0.97
HOMER3-208ENST00000595756 RANBP17Q9H2T7 1088 aaKnown RBP21.1■□□□□ 0.97
HOMER3-208ENST00000595756 TRIM43BA6NCK2 446 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 ADCY6O43306 1168 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 ICAM1P05362 532 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 ALAS1P13196 640 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 SDSP20132 328 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 NT5C2P49902 561 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 CCDC144BQ3MJ40 725 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 AKNAD1Q5T1N1 836 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 CCDC174Q6PII3 467 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 DEFB123Q8N688 67 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 TRIM43Q96BQ3 446 aaPredicted RBP21.09■□□□□ 0.97
HOMER3-208ENST00000595756 CHMP4CQ96CF2 233 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 TMEM47Q9BQJ4 181 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 STARD7Q9NQZ5 370 aa21.09■□□□□ 0.97
HOMER3-208ENST00000595756 ASB14A6NK59 587 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 GJA9P57773 515 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 HAND2P61296 217 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 MFSD6Q6ZSS7 791 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 ANKRD33Q7Z3H0 272 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 SH3RF1Q7Z6J0 888 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 TBC1D10CQ8IV04 446 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 PCSK9Q8NBP7 692 aaKnown RBP21.08■□□□□ 0.97
HOMER3-208ENST00000595756 BADQ92934 168 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 TOX2Q96NM4 488 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 RNF41Q9H4P4 317 aaPredicted RBP21.08■□□□□ 0.97
HOMER3-208ENST00000595756 SPC25Q9HBM1 224 aa21.08■□□□□ 0.97
HOMER3-208ENST00000595756 CCPG1Q9ULG6 757 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms