RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 UBA7P41226 1012 aa18.52■□□□□ 0.56
LIG1-206ENST00000594067 VSNL1P62760 191 aa18.52■□□□□ 0.56
LIG1-206ENST00000594067 SLC10A5Q5PT55 438 aa18.52■□□□□ 0.56
LIG1-206ENST00000594067 HEATR3Q7Z4Q2 680 aa18.52■□□□□ 0.56
LIG1-206ENST00000594067 NLRP3Q96P20 1036 aa18.52■□□□□ 0.56
LIG1-206ENST00000594067 MAD2L2Q9UI95 211 aa18.52■□□□□ 0.56
LIG1-206ENST00000594067 NDUFA10O95299 355 aa18.52■□□□□ 0.55
LIG1-206ENST00000594067 C12orf60Q5U649 245 aa18.52■□□□□ 0.55
LIG1-206ENST00000594067 DGKHQ86XP1 1220 aa18.52■□□□□ 0.55
LIG1-206ENST00000594067 TRIM47Q96LD4 638 aa18.52■□□□□ 0.55
LIG1-206ENST00000594067 SH3GLB2Q9NR46 395 aa18.52■□□□□ 0.55
LIG1-206ENST00000594067 THRAP3Q9Y2W1 955 aaKnown RBP18.52■□□□□ 0.55
LIG1-206ENST00000594067 CTAGE15A4D2H0 777 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 M0R2N6 131 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 KLRC4O43908 158 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 CTAGE8P0CG41 777 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 NCAPH2Q6IBW4 605 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 CTAGE6Q86UF2 777 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 CTAGE4Q8IX94 777 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 LRRC15Q8TF66 581 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 EEF2KMTQ96G04 330 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 MKNK2Q9HBH9 465 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 SRP68Q9UHB9 627 aaKnown RBP18.51■□□□□ 0.55
LIG1-206ENST00000594067 TFR2Q9UP52 801 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 PDS5AQ29RF7 1337 aaKnown RBP18.51■□□□□ 0.55
LIG1-206ENST00000594067 LGALS16A8MUM7 142 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 TRIM66O15016 1216 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 GRM4Q14833 912 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 WHAMMP3Q1A5X7 153 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 OR8K1Q8NGG5 319 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 ANKRD2Q9GZV1 360 aa18.51■□□□□ 0.55
LIG1-206ENST00000594067 LUC7L2Q9Y383 392 aaKnown RBP18.51■□□□□ 0.55
LIG1-206ENST00000594067 CYTH3O43739 400 aa18.5■□□□□ 0.55
LIG1-206ENST00000594067 CASP8Q14790 479 aa18.5■□□□□ 0.55
LIG1-206ENST00000594067 SLC51AQ86UW1 340 aa18.5■□□□□ 0.55
LIG1-206ENST00000594067 SLC44A5Q8NCS7 719 aa18.5■□□□□ 0.55
LIG1-206ENST00000594067 SH3RF3Q8TEJ3 882 aaPredicted RBP18.5■□□□□ 0.55
LIG1-206ENST00000594067 MYO1AQ9UBC5 1043 aa18.5■□□□□ 0.55
LIG1-206ENST00000594067 MYO6Q9UM54 1294 aa18.5■□□□□ 0.55
LIG1-206ENST00000594067 FAN1Q9Y2M0 1017 aa18.5■□□□□ 0.55
LIG1-206ENST00000594067 COL22A1Q8NFW1 1626 aaPredicted RBP18.5■□□□□ 0.55
LIG1-206ENST00000594067 EIF3JO75822 258 aaKnown RBP18.5■□□□□ 0.55
LIG1-206ENST00000594067 NBPF5PQ86XG9 351 aaPredicted RBP18.5■□□□□ 0.55
LIG1-206ENST00000594067 NOA1Q8NC60 698 aaKnown RBP18.5■□□□□ 0.55
LIG1-206ENST00000594067 ZNF507Q8TCN5 953 aa18.5■□□□□ 0.55
LIG1-206ENST00000594067 GOLGA8HP0CJ92 632 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 AMPD2Q01433 879 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 KCNB1Q14721 858 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 SRLQ86TD4 932 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 RASSF4Q9H2L5 321 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 CPVLQ9H3G5 476 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 PSMA7O14818 248 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 TSPY3P0CV98 308 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 TSPY8P0CW00 308 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 PIP4K2BP78356 416 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 STIM1Q13586 685 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 SETDB2Q96T68 719 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 MAGEC2Q9UBF1 373 aaPredicted RBP18.49■□□□□ 0.55
LIG1-206ENST00000594067 MKRN1Q9UHC7 482 aaKnown RBP18.49■□□□□ 0.55
LIG1-206ENST00000594067 STX8Q9UNK0 236 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
LIG1-206ENST00000594067 LAMB1P07942 1786 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 B4DLN1 442 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 STXBP3O00186 592 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 ENC1O14682 589 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 EEF1GP26641 437 aaKnown RBP18.48■□□□□ 0.55
LIG1-206ENST00000594067 GNAQP50148 359 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 DIXDC1Q155Q3 683 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 WDR59Q6PJI9 974 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 C10orf67Q8IYJ2 551 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 GIMAP8Q8ND71 665 aaPredicted RBP18.48■□□□□ 0.55
LIG1-206ENST00000594067 THAP9Q9H5L6 903 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 HDAC6Q9UBN7 1215 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 RHOBTB3O94955 611 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 CCDC148Q8NFR7 591 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 DNAJC7Q99615 494 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 CCSER1Q9C0I3 900 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 KBTBD4Q9NVX7 518 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 CAPN11Q9UMQ6 739 aa18.48■□□□□ 0.55
LIG1-206ENST00000594067 A0A1W2PQC6 194 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 HERVK_113P62684 666 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
LIG1-206ENST00000594067 TSR1Q2NL82 804 aaKnown RBP18.47■□□□□ 0.55
LIG1-206ENST00000594067 SPTY2D1Q68D10 685 aaPredicted RBP18.47■□□□□ 0.55
LIG1-206ENST00000594067 TTI2Q6NXR4 508 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 LEKR1Q6ZMV7 388 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 ANKS1AQ92625 1134 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 BARHL2Q9NY43 387 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 RRP15Q9Y3B9 282 aaKnown RBP18.47■□□□□ 0.55
LIG1-206ENST00000594067 RPS6KA5O75582 802 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 KLK7P49862 253 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 GRIK5Q16478 980 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 ZNF444Q8N0Y2 327 aaPredicted RBP18.47■□□□□ 0.55
LIG1-206ENST00000594067 TGFBRAP1Q8WUH2 860 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 DUSP9Q99956 384 aaKnown RBP18.47■□□□□ 0.55
LIG1-206ENST00000594067 NYXQ9GZU5 481 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 GBP3Q9H0R5 595 aa18.47■□□□□ 0.55
LIG1-206ENST00000594067 SAP30BPQ9UHR5 308 aaKnown RBP18.47■□□□□ 0.55
LIG1-206ENST00000594067 LRRIQ3A6PVS8 624 aaPredicted RBP18.46■□□□□ 0.55
LIG1-206ENST00000594067 LDHBP07195 334 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms