RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NDUFV1P49821 464 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 CLCN5P51795 746 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 PSMC6P62333 389 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 ARHGAP8P85298 464 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 LMNB2Q03252 620 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 GOLGA2Q08379 1002 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 EPC2Q52LR7 807 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 VARS2Q5ST30 1063 aaKnown RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 CC2D1BQ5T0F9 858 aaKnown RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 C19orf48Q6RUI8 117 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 CXCL17Q6UXB2 119 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 PPP4R3CPQ6ZMV5 832 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 UBE3BQ7Z3V4 1068 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 KDF1Q8NAX2 398 aaPredicted RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 SLC43A3Q8NBI5 491 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 SMRP1Q8NCR6 262 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 SHCBP1Q8NEM2 672 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 GTF3C2Q8WUA4 911 aaPredicted RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 PPP1R13LQ8WUF5 828 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 RUNDC1Q96C34 613 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 ZNF594Q96JF6 807 aaPredicted RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 RAD9AQ99638 391 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 MRIQ9BWK5 157 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 PHF7Q9BWX1 381 aaPredicted RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 LSM14BQ9BX40 385 aaKnown RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 OSBPL5Q9H0X9 879 aaPredicted RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 EMILIN3Q9NT22 766 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 TRMT13Q9NUP7 481 aaKnown RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 ANKFY1Q9P2R3 1169 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 CTNNA3Q9UI47 895 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 RELNP78509 3460 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 ABCA12Q86UK0 2595 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 SPDYE16A6NNV3 312 aaPredicted RBP3.92□□□□□ -1.78
VRK3-204ENST00000593912 USP17L10C9JJH3 530 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 H3BNC9 293 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 SLC30A4O14863 429 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 CTAGE5O15320 804 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 ENTPD3O75355 529 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 PGK2P07205 417 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 ASGR2P07307 311 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 NPR3P17342 541 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 AOC1P19801 751 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 CST5P28325 142 aaPredicted RBP3.92□□□□□ -1.78
VRK3-204ENST00000593912 PRDX5P30044 214 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 ITGA7Q13683 1181 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 NFE2L2Q16236 605 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 CWF19L2Q2TBE0 894 aaKnown RBP3.92□□□□□ -1.78
VRK3-204ENST00000593912 GNASQ5JWF2 1037 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 PDZD3Q86UT5 571 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 PCSK9Q8NBP7 692 aaKnown RBP3.92□□□□□ -1.78
VRK3-204ENST00000593912 SPATA18Q8TC71 538 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 TBC1D22AQ8WUA7 517 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 PIK3R5Q8WYR1 880 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 TINF2Q9BSI4 451 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 WDR18Q9BV38 432 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 TMEM121BQ9BXQ6 578 aaPredicted RBP3.92□□□□□ -1.78
VRK3-204ENST00000593912 TBC1D2Q9BYX2 928 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 AS3MTQ9HBK9 375 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 CLEC1BQ9P126 229 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 ZHX1Q9UKY1 873 aaPredicted RBP3.92□□□□□ -1.78
VRK3-204ENST00000593912 BARX2Q9UMQ3 279 aaPredicted RBP3.92□□□□□ -1.78
VRK3-204ENST00000593912 SRPK3Q9UPE1 567 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 MICAL3Q7RTP6 2002 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 CELSR3Q9NYQ7 3312 aa3.92□□□□□ -1.78
VRK3-204ENST00000593912 MYO9AB2RTY4 2548 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 ANKRD18BA2A2Z9 1011 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 EIF4E1BA6NMX2 242 aaKnown RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L15C9J2P7 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L13C9JLJ4 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L11C9JVI0 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L18D6R9N7 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L22D6RA61 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L17D6RBQ6 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L19D6RCP7 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L20D6RJB6 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 DUSP11O75319 330 aaKnown RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 BAIAP3O94812 1187 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 GDF11O95390 407 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 TOP3BO95985 862 aaKnown RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 CSF1RP07333 972 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 SP9P0CG40 484 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 LAMA1P25391 3075 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 RBM10P98175 930 aaKnown RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 USP17L24Q0WX57 530 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 ADAM15Q13444 863 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 MTMR3Q13615 1198 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 ZC3H14Q6PJT7 736 aaKnown RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 FBXO33Q7Z6M2 555 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 ADGRD2Q7Z7M1 963 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 NCAPG2Q86XI2 1143 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 VPS37DQ86XT2 251 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 SPNS2Q8IVW8 549 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 ZGPATQ8N5A5 531 aaKnown RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 ZCCHC14Q8WYQ9 949 aaKnown RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 KIF12Q96FN5 646 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 METTL22Q9BUU2 404 aaPredicted RBP3.91□□□□□ -1.78
VRK3-204ENST00000593912 IDI2Q9BXS1 227 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 HYPKQ9NX55 129 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms