RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TCP11L1Q9NUJ3 509 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 FAM184BQ9ULE4 1060 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 PHF24Q9UPV7 400 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 CCDC171Q6TFL3 1326 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 PLXNB2O15031 1838 aa8.98□□□□□ -0.97
NPC1-208ENST00000590301 A0A0D9SFI3 127 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 ZNF865P0CJ78 1059 aaPredicted RBP8.97□□□□□ -0.97
NPC1-208ENST00000590301 HSPD1P10809 573 aaKnown RBP8.97□□□□□ -0.97
NPC1-208ENST00000590301 TOP1P11387 765 aaKnown RBP8.97□□□□□ -0.97
NPC1-208ENST00000590301 SYN1P17600 705 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 MCCP23508 829 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 CTDSPL2Q05D32 466 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 NMIQ13287 307 aaPredicted RBP8.97□□□□□ -0.97
NPC1-208ENST00000590301 PRAMEF19Q5SWL8 479 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 GJC2Q5T442 439 aaPredicted RBP8.97□□□□□ -0.97
NPC1-208ENST00000590301 VPS53Q5VIR6 699 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 SLC39A5Q6ZMH5 540 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 TDHQ8IZJ6 230 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 SP7Q8TDD2 431 aaPredicted RBP8.97□□□□□ -0.97
NPC1-208ENST00000590301 TTC14Q96N46 770 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 UBE2OQ9C0C9 1292 aaKnown RBP8.97□□□□□ -0.97
NPC1-208ENST00000590301 ABHD16BQ9H3Z7 469 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 ACAD9Q9H845 621 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 SPC25Q9HBM1 224 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 IL17RBQ9NRM6 502 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 ISY1Q9ULR0 285 aaKnown RBP8.97□□□□□ -0.97
NPC1-208ENST00000590301 RIPK3Q9Y572 518 aa8.97□□□□□ -0.97
NPC1-208ENST00000590301 MOXD2PA6NHM9 499 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 POTEB2H3BUK9 544 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 DUSP11O75319 330 aaKnown RBP8.96□□□□□ -0.98
NPC1-208ENST00000590301 SDSP20132 328 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 ADCYAP1R1P41586 468 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 ATN1P54259 1190 aaPredicted RBP8.96□□□□□ -0.98
NPC1-208ENST00000590301 RTP1P59025 263 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 CCDC178Q5BJE1 867 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 AKNAD1Q5T1N1 836 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 B4GALNT3Q6L9W6 998 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 BTNL9Q6UXG8 535 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 MFSD6Q6ZSS7 791 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 NUP133Q8WUM0 1156 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 ESR2Q92731 530 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 RILPL2Q969X0 211 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 TOMM22Q9NS69 142 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 DIAPH3Q9NSV4 1193 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 RNF146Q9NTX7 359 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 RYDENQ9NUL5 291 aaKnown RBP8.96□□□□□ -0.98
NPC1-208ENST00000590301 ATP11BQ9Y2G3 1177 aa8.96□□□□□ -0.98
NPC1-208ENST00000590301 LOC102724159A0A0B4J2E5 919 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 ASB14A6NK59 587 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 ZNF213O14771 459 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 SNAI1O95863 264 aaPredicted RBP8.95□□□□□ -0.98
NPC1-208ENST00000590301 IGHDP01880 384 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 ICAM1P05362 532 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 TAL1P17542 331 aaPredicted RBP8.95□□□□□ -0.98
NPC1-208ENST00000590301 CST5P28325 142 aaPredicted RBP8.95□□□□□ -0.98
NPC1-208ENST00000590301 SLC4A3P48751 1232 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 ACVR2BQ13705 512 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 PWP2Q15269 919 aaKnown RBP8.95□□□□□ -0.98
NPC1-208ENST00000590301 CCDC96Q2M329 555 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 ANO1Q5XXA6 986 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 KCTD1Q719H9 257 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 ZNF589Q86UQ0 364 aaPredicted RBP8.95□□□□□ -0.98
NPC1-208ENST00000590301 FAM133AQ8N9E0 248 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 EXOC6Q8TAG9 804 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 MAF1Q9H063 256 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.95□□□□□ -0.98
NPC1-208ENST00000590301 CTNNA3Q9UI47 895 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 ZHX1Q9UKY1 873 aaPredicted RBP8.95□□□□□ -0.98
NPC1-208ENST00000590301 PRR12Q9ULL5 1215 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 ZNF536O15090 1300 aa8.95□□□□□ -0.98
NPC1-208ENST00000590301 GREB1LQ9C091 1923 aaPredicted RBP8.94□□□□□ -0.98
NPC1-208ENST00000590301 A0A1W2PQ45 241 aaPredicted RBP8.94□□□□□ -0.98
NPC1-208ENST00000590301 A0A1W2PQY0 241 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 NMT2O60551 498 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 ADAMTS4O75173 837 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 PGK1P00558 417 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 PRR29P0C7W0 189 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 ACLYP53396 1101 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 NKX3-2P78367 333 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 TRIM60Q495X7 471 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 RRP12Q5JTH9 1297 aaKnown RBP8.94□□□□□ -0.98
NPC1-208ENST00000590301 GPATCH4Q5T3I0 446 aaKnown RBP8.94□□□□□ -0.98
NPC1-208ENST00000590301 SYDE2Q5VT97 1194 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 ARMCX2Q7L311 632 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 DGKHQ86XP1 1220 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 PCSK9Q8NBP7 692 aaKnown RBP8.94□□□□□ -0.98
NPC1-208ENST00000590301 KLHDC9Q8NEP7 349 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 FGD4Q96M96 766 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 AGBL1Q96MI9 1066 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 TOX2Q96NM4 488 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 TRERF1Q96PN7 1200 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 TMEM47Q9BQJ4 181 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 DSCC1Q9BVC3 393 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 UPF3AQ9H1J1 476 aaKnown RBP8.94□□□□□ -0.98
NPC1-208ENST00000590301 RANBP17Q9H2T7 1088 aaKnown RBP8.94□□□□□ -0.98
NPC1-208ENST00000590301 A1CFQ9NQ94 594 aaKnown RBP8.94□□□□□ -0.98
NPC1-208ENST00000590301 INCENPQ9NQS7 918 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 HOMER2Q9NSB8 354 aa8.94□□□□□ -0.98
NPC1-208ENST00000590301 CCPG1Q9ULG6 757 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms