RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 hCG_1642624A0A1W2PR95 340 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 JAK2O60674 1132 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 DTNBO60941 627 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 GCLCP48506 637 aaPredicted RBP17.57■□□□□ 0.4
ATG4D-211ENST00000589753 QRICH1Q2TAL8 776 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 CCDC174Q6PII3 467 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 SMARCC2Q8TAQ2 1214 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 INTS4Q96HW7 963 aaKnown RBP17.57■□□□□ 0.4
ATG4D-211ENST00000589753 ZFYVE28Q9HCC9 887 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 A0A0G2JMZ2 1700 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 DEXIO95424 95 aa17.56■□□□□ 0.4
ATG4D-211ENST00000589753 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
ATG4D-211ENST00000589753 OAZ1P54368 228 aa17.56■□□□□ 0.4
ATG4D-211ENST00000589753 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
ATG4D-211ENST00000589753 POTEEQ6S8J3 1075 aa17.56■□□□□ 0.4
ATG4D-211ENST00000589753 REPS2Q8NFH8 660 aa17.56■□□□□ 0.4
ATG4D-211ENST00000589753 DDX11Q96FC9 970 aa17.56■□□□□ 0.4
ATG4D-211ENST00000589753 PAGR1Q9BTK6 254 aa17.56■□□□□ 0.4
ATG4D-211ENST00000589753 ORC3Q9UBD5 711 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-211ENST00000589753 RABGAP1Q9Y3P9 1069 aa17.56■□□□□ 0.4
ATG4D-211ENST00000589753 ZNF536O15090 1300 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 ATP2A1O14983 1001 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 CA12O43570 354 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 ICAM1P05362 532 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 FDPSP14324 419 aaKnown RBP17.55■□□□□ 0.4
ATG4D-211ENST00000589753 CRHR2Q13324 411 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 TMEM132BQ14DG7 1078 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 PFKFB3Q16875 520 aaPredicted RBP17.55■□□□□ 0.4
ATG4D-211ENST00000589753 FBXO11Q86XK2 927 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 CPXCR1Q8N123 301 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 AMNQ9BXJ7 453 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 RAVER2Q9HCJ3 691 aaKnown RBP17.55■□□□□ 0.4
ATG4D-211ENST00000589753 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 BTBD7Q9P203 1132 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 RBPJLQ9UBG7 517 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 PNMA2Q9UL42 364 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 SMC3Q9UQE7 1217 aa17.55■□□□□ 0.4
ATG4D-211ENST00000589753 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-211ENST00000589753 ADGRA2Q96PE1 1338 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 TLR2O60603 784 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 CNMDO75829 334 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 SCG2P13521 617 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 TRAF1Q13077 416 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 PLS1Q14651 629 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 PKN1Q16512 942 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 ANKRD13CQ8N6S4 541 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 WASF1Q92558 559 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 AGBL1Q96MI9 1066 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 TXNRD2Q9NNW7 524 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 ZNF214Q9UL59 606 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-211ENST00000589753 CCPG1Q9ULG6 757 aa17.54■□□□□ 0.4
ATG4D-211ENST00000589753 PEX10O60683 326 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 PPP1R11O60927 126 aaPredicted RBP17.53■□□□□ 0.4
ATG4D-211ENST00000589753 GJB2P29033 226 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 STAT3P40763 770 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 USH1GQ495M9 461 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 SNRNP48Q6IEG0 339 aaKnown RBP17.53■□□□□ 0.4
ATG4D-211ENST00000589753 HEATR3Q7Z4Q2 680 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 DNAJC5GQ8N7S2 189 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 FAM184AQ8NB25 1140 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 GPRC5AQ8NFJ5 357 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 TEX13BQ9BXU2 312 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 SPATC1LQ9H0A9 340 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 RNF186Q9NXI6 227 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 MORF4L1Q9UBU8 362 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 CPA4Q9UI42 421 aa17.53■□□□□ 0.4
ATG4D-211ENST00000589753 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
ATG4D-211ENST00000589753 hCG_1984214I3L0E3 225 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 SLC4A3P48751 1232 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 ERVK-9P63128 1117 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 ERVK-24P63145 666 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 MAP2K1Q02750 393 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-211ENST00000589753 FAM110CQ1W6H9 321 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 WWC2Q6AWC2 1192 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 ZNF713Q8N859 430 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-211ENST00000589753 SPRYD3Q8NCJ5 442 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 GPKOWQ92917 476 aaPredicted RBP eCLIP17.52■□□□□ 0.4
ATG4D-211ENST00000589753 COA7Q96BR5 231 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 ALG1Q9BT22 464 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-211ENST00000589753 KIF3AQ9Y496 699 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 PCDHA1Q9Y5I3 950 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 MYH6P13533 1939 aa17.52■□□□□ 0.4
ATG4D-211ENST00000589753 ABCB11O95342 1321 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 TRPA1O75762 1119 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 BCRP11274 1271 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 ALAS1P13196 640 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 Q3C1V9 767 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 C17orf99Q6UX52 265 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 RIOX2Q8IUF8 465 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 AIFM3Q96NN9 605 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 CFHR5Q9BXR6 569 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 BARHL2Q9NY43 387 aa17.51■□□□□ 0.39
ATG4D-211ENST00000589753 STXBP3O00186 592 aa17.5■□□□□ 0.39
ATG4D-211ENST00000589753 SLC25A27O95847 323 aa17.5■□□□□ 0.39
ATG4D-211ENST00000589753 TAL1P17542 331 aaPredicted RBP17.5■□□□□ 0.39
ATG4D-211ENST00000589753 XBP1P17861 261 aa17.5■□□□□ 0.39
ATG4D-211ENST00000589753 COPB2P35606 906 aa17.5■□□□□ 0.39
ATG4D-211ENST00000589753 NAPAP54920 295 aa17.5■□□□□ 0.39
ATG4D-211ENST00000589753 CCNA1P78396 465 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms