RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 RBAK-RBAKDNI3L0D1 243 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 CD4P01730 458 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 RASA1P20936 1047 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 CST5P28325 142 aaPredicted RBP18.12■□□□□ 0.49
SF3A2-204ENST00000589118 GJA9P57773 515 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 TFF2Q03403 129 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 AKNAD1Q5T1N1 836 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 CXCL17Q6UXB2 119 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 ARMCX2Q7L311 632 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 CCDC144CPQ8IYA2 1237 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 ANKRD35Q8N283 1001 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 KATNBL1Q9H079 304 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 UPF3AQ9H1J1 476 aaKnown RBP18.12■□□□□ 0.49
SF3A2-204ENST00000589118 IL23AQ9NPF7 189 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 HOMER2Q9NSB8 354 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 CLIP2Q9UDT6 1046 aa18.12■□□□□ 0.49
SF3A2-204ENST00000589118 RFXAPO00287 272 aa18.11■□□□□ 0.49
SF3A2-204ENST00000589118 MRPS5P82675 430 aaKnown RBP18.11■□□□□ 0.49
SF3A2-204ENST00000589118 MSL3Q8N5Y2 521 aaKnown RBP18.11■□□□□ 0.49
SF3A2-204ENST00000589118 PCSK9Q8NBP7 692 aaKnown RBP18.11■□□□□ 0.49
SF3A2-204ENST00000589118 KIF1BPQ96EK5 621 aa18.11■□□□□ 0.49
SF3A2-204ENST00000589118 MSRAQ9UJ68 235 aa18.11■□□□□ 0.49
SF3A2-204ENST00000589118 ZBED9Q6R2W3 1325 aa18.11■□□□□ 0.49
SF3A2-204ENST00000589118 REV3LO60673 3130 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 GRIN2DO15399 1336 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 MROH7Q68CQ1 1323 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 MINDY4BA8MYZ0 360 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 ZBED4O75132 1171 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 PRDM1O75626 825 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 FGBP02675 491 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 COPB2P35606 906 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 PSMC6P62333 389 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 PSRC1Q6PGN9 363 aaPredicted RBP18.1■□□□□ 0.49
SF3A2-204ENST00000589118 NOL8Q76FK4 1167 aaKnown RBP18.1■□□□□ 0.49
SF3A2-204ENST00000589118 AMOTL1Q8IY63 956 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 PRPF38AQ8NAV1 312 aaKnown RBP18.1■□□□□ 0.49
SF3A2-204ENST00000589118 HERVK_113Q902F9 699 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 TRPV6Q9H1D0 765 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 ABHD16BQ9H3Z7 469 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 BDP1A6H8Y1 2624 aa18.1■□□□□ 0.49
SF3A2-204ENST00000589118 TLR3O15455 904 aaKnown RBP18.09■□□□□ 0.49
SF3A2-204ENST00000589118 ATP5JP18859 108 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 HSP90AB4PQ58FF6 505 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 LRRC47Q8N1G4 583 aaKnown RBP18.09■□□□□ 0.49
SF3A2-204ENST00000589118 PPP1R13LQ8WUF5 828 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 VWCEQ96DN2 955 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 SCLYQ96I15 445 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 HAUS7Q99871 368 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 SLC28A3Q9HAS3 691 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 SPC25Q9HBM1 224 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 PDGFCQ9NRA1 345 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 CTDP1Q9Y5B0 961 aaPredicted RBP18.09■□□□□ 0.49
SF3A2-204ENST00000589118 SCN5AQ14524 2016 aa18.09■□□□□ 0.49
SF3A2-204ENST00000589118 SOWAHBA6NEL2 793 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 GSG1L2A8MUP6 293 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 SMARCA5O60264 1052 aaPredicted RBP18.08■□□□□ 0.48
SF3A2-204ENST00000589118 KCNQ1P51787 676 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 SNAP25P60880 206 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 UBE3CQ15386 1083 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 EEPD1Q7L9B9 569 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 ZNF467Q7Z7K2 595 aaPredicted RBP18.08■□□□□ 0.48
SF3A2-204ENST00000589118 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.08■□□□□ 0.481e-6■■□□□ 12.8
SF3A2-204ENST00000589118 WNT8AQ9H1J5 351 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 HIPK3Q9H422 1215 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 CERS4Q9HA82 394 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 MKNK2Q9HBH9 465 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 SLC38A10Q9HBR0 1119 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 NYAP2Q9P242 653 aa18.08■□□□□ 0.48
SF3A2-204ENST00000589118 TNFAIP2Q03169 654 aa18.07■□□□□ 0.48
SF3A2-204ENST00000589118 RAB30Q15771 203 aa18.07■□□□□ 0.48
SF3A2-204ENST00000589118 KRT40Q6A162 431 aa18.07■□□□□ 0.48
SF3A2-204ENST00000589118 CCDC174Q6PII3 467 aa18.07■□□□□ 0.48
SF3A2-204ENST00000589118 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
SF3A2-204ENST00000589118 AGBL1Q96MI9 1066 aa18.07■□□□□ 0.48
SF3A2-204ENST00000589118 PURBQ96QR8 312 aaKnown RBP18.07■□□□□ 0.48
SF3A2-204ENST00000589118 STRBPQ96SI9 672 aaKnown RBP18.07■□□□□ 0.48
SF3A2-204ENST00000589118 LRRC37A2A6NM11 1700 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 IGKV6D-41A0A0C4DH26 115 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 ATP2A1O14983 1001 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
SF3A2-204ENST00000589118 B4GALT4O60513 344 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 BMP1P13497 986 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 ITGA7Q13683 1181 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 SLC43A3Q8NBI5 491 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 CEP95Q96GE4 821 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 NOC4LQ9BVI4 516 aaKnown RBP18.06■□□□□ 0.48
SF3A2-204ENST00000589118 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
SF3A2-204ENST00000589118 NCOR1O75376 2440 aa18.06■□□□□ 0.48
SF3A2-204ENST00000589118 CHD7Q9P2D1 2997 aa18.05■□□□□ 0.48
SF3A2-204ENST00000589118 ZBBXA8MT70 800 aa18.05■□□□□ 0.48
SF3A2-204ENST00000589118 SMPD1P17405 629 aa18.05■□□□□ 0.48
SF3A2-204ENST00000589118 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
SF3A2-204ENST00000589118 FAM133AQ8N9E0 248 aa18.05■□□□□ 0.48
SF3A2-204ENST00000589118 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
SF3A2-204ENST00000589118 EPB41L4AQ9HCS5 686 aaPredicted RBP18.05■□□□□ 0.48
SF3A2-204ENST00000589118 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
SF3A2-204ENST00000589118 GNEQ9Y223 722 aaKnown RBP18.05■□□□□ 0.48
SF3A2-204ENST00000589118 COG6Q9Y2V7 657 aa18.05■□□□□ 0.48
SF3A2-204ENST00000589118 LCTP09848 1927 aa18.05■□□□□ 0.48
SF3A2-204ENST00000589118 PLA2G5P39877 138 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms