RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 IGDCC3Q8IVU1 814 aa5.69□□□□□ -1.5
SMAD4-207ENST00000589076 SYT8Q8NBV8 401 aa5.69□□□□□ -1.5
SMAD4-207ENST00000589076 BDH2Q9BUT1 245 aa5.69□□□□□ -1.5
SMAD4-207ENST00000589076 PRDM14Q9GZV8 571 aa5.69□□□□□ -1.5
SMAD4-207ENST00000589076 ADAM7Q9H2U9 754 aa5.69□□□□□ -1.5
SMAD4-207ENST00000589076 USP40Q9NVE5 1235 aa5.69□□□□□ -1.5
SMAD4-207ENST00000589076 SUPT16HQ9Y5B9 1047 aaKnown RBP5.69□□□□□ -1.5
SMAD4-207ENST00000589076 PCDHB12Q9Y5F1 795 aa5.69□□□□□ -1.5
SMAD4-207ENST00000589076 PCDHA5Q9Y5H7 936 aa5.69□□□□□ -1.5
SMAD4-207ENST00000589076 MEIS1O00470 390 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 TLR3O15455 904 aaKnown RBP5.68□□□□□ -1.5
SMAD4-207ENST00000589076 EFEMP2O95967 443 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 CTSHP09668 335 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 CAP1Q01518 475 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 CBX2Q14781 532 aaPredicted RBP5.68□□□□□ -1.5
SMAD4-207ENST00000589076 LRRFIP1Q32MZ4 808 aaKnown RBP5.68□□□□□ -1.5
SMAD4-207ENST00000589076 ZPBP2Q6X784 338 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 GGNQ86UU5 652 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 GPR20Q99678 358 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 ACSL6Q9UKU0 697 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 CNOT11Q9UKZ1 510 aaKnown RBP5.68□□□□□ -1.5
SMAD4-207ENST00000589076 FAN1Q9Y2M0 1017 aa5.68□□□□□ -1.5
SMAD4-207ENST00000589076 ATE1O95260 518 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 MAPKAPK2P49137 400 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 SNW1Q13573 536 aaKnown RBP5.67□□□□□ -1.5
SMAD4-207ENST00000589076 UBXN11Q5T124 520 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 CDCP2Q5VXM1 449 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 CWF19L1Q69YN2 538 aaKnown RBP5.67□□□□□ -1.5
SMAD4-207ENST00000589076 OVOS1Q6IE37 1185 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 RPTNQ6XPR3 784 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 NLRC3Q7RTR2 1065 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 SLCO6A1Q86UG4 719 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 DSCC1Q9BVC3 393 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 TMPRSS5Q9H3S3 457 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 BRMS1Q9HCU9 246 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 TNFRSF12AQ9NP84 129 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 ERVK13-1Q9NX77 482 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 ADAMTS20P59510 1910 aa5.67□□□□□ -1.5
SMAD4-207ENST00000589076 K7ESM1 405 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 ZNF205O95201 554 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 NCKAP1LP55160 1127 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 NFKB2Q00653 900 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 EFEMP1Q12805 493 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 HLA-DQA1Q5Y7H0 255 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 FBXO27Q8NI29 283 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 FAM161BQ96MY7 647 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 LRRC3Q9BY71 257 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 BACH2Q9BYV9 841 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 IGSF5Q9NSI5 407 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 PRR13Q9NZ81 148 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 IMPACTQ9P2X3 320 aa5.66□□□□□ -1.5
SMAD4-207ENST00000589076 GSNP06396 782 aa5.65□□□□□ -1.5
SMAD4-207ENST00000589076 VAV1P15498 845 aa5.65□□□□□ -1.5
SMAD4-207ENST00000589076 POLR2BP30876 1174 aaKnown RBP5.65□□□□□ -1.5
SMAD4-207ENST00000589076 SLURP1P55000 103 aa5.65□□□□□ -1.5
SMAD4-207ENST00000589076 ZNF827Q17R98 1081 aa5.65□□□□□ -1.5
SMAD4-207ENST00000589076 PLEKHN1Q494U1 663 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-207ENST00000589076 PAQR3Q6TCH7 311 aa5.65□□□□□ -1.5
SMAD4-207ENST00000589076 ZNF512BQ96KM6 892 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-207ENST00000589076 DHRS1Q96LJ7 313 aa5.65□□□□□ -1.5
SMAD4-207ENST00000589076 ANTXR1Q9H6X2 564 aa5.65□□□□□ -1.5
SMAD4-207ENST00000589076 GFOD1Q9NXC2 390 aa5.65□□□□□ -1.5
SMAD4-207ENST00000589076 DBR1Q9UK59 544 aaKnown RBP5.65□□□□□ -1.5
SMAD4-207ENST00000589076 CYBBP04839 570 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 MCM4P33991 863 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 EIF4A3P38919 411 aaKnown RBP5.64□□□□□ -1.51
SMAD4-207ENST00000589076 ZNF200P98182 395 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-207ENST00000589076 KIR3DS1Q14943 382 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 ZFYVE27Q5T4F4 411 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 TMEM87AQ8NBN3 555 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 ATG4CQ96DT6 458 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 EHMT1Q9H9B1 1298 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 AP5S1Q9NUS5 200 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 KBTBD4Q9NVX7 518 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 SUSD2Q9UGT4 822 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 MYRFQ9Y2G1 1151 aa5.64□□□□□ -1.51
SMAD4-207ENST00000589076 SCAMP3O14828 347 aaKnown RBP5.63□□□□□ -1.51
SMAD4-207ENST00000589076 RECKO95980 971 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 GSTM1P09488 218 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 INSRRP14616 1297 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 TCF3P15923 654 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 NOP2P46087 812 aaKnown RBP5.63□□□□□ -1.51
SMAD4-207ENST00000589076 ZNF165P49910 485 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 AUHQ13825 339 aaKnown RBP5.63□□□□□ -1.51
SMAD4-207ENST00000589076 RTP5Q14D33 572 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 BICRALQ6AI39 1079 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 FBXL19Q6PCT2 694 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 CYP2R1Q6VVX0 501 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 USP48Q86UV5 1035 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 RNF38Q9H0F5 515 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 PMF1-BGLAPU3KQ54 211 aa5.63□□□□□ -1.51
SMAD4-207ENST00000589076 FFAR3O14843 346 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 MSL3P1P0C860 447 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 GARTP22102 1010 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 LIMS1P48059 325 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 FOXO4P98177 505 aa5.62□□□□□ -1.51
SMAD4-207ENST00000589076 PUM1Q14671 1186 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMAD4-207ENST00000589076 NOL9Q5SY16 702 aaKnown RBP5.62□□□□□ -1.51
SMAD4-207ENST00000589076 LDLRAD1Q5T700 205 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms