RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 PIGSQ96S52 555 aa17.95■□□□□ 0.46
RPRD1A-208ENST00000589050 RAVER2Q9HCJ3 691 aaKnown RBP17.95■□□□□ 0.46
RPRD1A-208ENST00000589050 SH2B1Q9NRF2 756 aaPredicted RBP17.95■□□□□ 0.46
RPRD1A-208ENST00000589050 TSKSQ9UJT2 592 aa17.95■□□□□ 0.46
RPRD1A-208ENST00000589050 OAZ1P54368 228 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 FUT2Q10981 343 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 HOMER1Q86YM7 354 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 GTF3C6Q969F1 213 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 MTMR8Q96EF0 704 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 RRP36Q96EU6 259 aaKnown RBP17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 SPATC1LQ9H0A9 340 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 ZNF214Q9UL59 606 aaPredicted RBP17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 A0A0G2JMZ2 1700 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 CNTNAP5Q8WYK1 1306 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 RLFQ13129 1914 aa17.94■□□□□ 0.46
RPRD1A-208ENST00000589050 GPR25O00155 361 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 ATP2A1O14983 1001 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 ZBTB5O15062 677 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 STAT3P40763 770 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 SLC4A3P48751 1232 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 NTRK3Q16288 839 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 QRICH1Q2TAL8 776 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 Q3C1V9 767 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 SNRNP48Q6IEG0 339 aaKnown RBP17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 AGBL1Q96MI9 1066 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 TEX13BQ9BXU2 312 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 SEC63Q9UGP8 760 aaKnown RBP17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 ZNF536O15090 1300 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 PARP14Q460N5 1801 aa17.93■□□□□ 0.46
RPRD1A-208ENST00000589050 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 PPFIA3O75145 1194 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 CDKL5O76039 1030 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 ICAM1P05362 532 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 HSPA1AP0DMV8 641 aaKnown RBP17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 HSPA1BP0DMV9 641 aaKnown RBP17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 IFNAR1P17181 557 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 CCNA1P78396 465 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 CCDC83Q8IWF9 413 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 PHKBQ93100 1093 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 TMX3Q96JJ7 454 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 MOV10L1Q9BXT6 1211 aaKnown RBP17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 CCPG1Q9ULG6 757 aa17.92■□□□□ 0.46
RPRD1A-208ENST00000589050 PNMA6FA0A0J9YX94 578 aa17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 AKAP17AQ02040 695 aaKnown RBP17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 SP3Q02447 781 aa17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 ST3GAL1Q11201 340 aa17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 FBXO11Q86XK2 927 aa17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 RIOX2Q8IUF8 465 aa17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 CCAR1Q8IX12 1150 aaKnown RBP17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 SLC26A6Q9BXS9 759 aa17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 PNMA2Q9UL42 364 aa17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 V9GY48 417 aaPredicted RBP17.91■□□□□ 0.46
RPRD1A-208ENST00000589050 FOXN1O15353 648 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 PRPF3O43395 683 aaKnown RBP17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 PPP1R11O60927 126 aaPredicted RBP17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 SLC25A27O95847 323 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 ALAS1P13196 640 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 TAL1P17542 331 aaPredicted RBP17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 SSRP1Q08945 709 aaKnown RBP17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 USH1GQ495M9 461 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 NOM1Q5C9Z4 860 aaKnown RBP17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 WDR78Q5VTH9 848 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 NCAPG2Q86XI2 1143 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 TRIM22Q8IYM9 498 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 SNX21Q969T3 373 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 AMNQ9BXJ7 453 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 RNF26Q9BY78 433 aaPredicted RBP17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 PORCNQ9H237 461 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 HOMER2Q9NSB8 354 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 RIPK3Q9Y572 518 aa17.9■□□□□ 0.46
RPRD1A-208ENST00000589050 CEP350Q5VT06 3117 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 FKTNO75072 461 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 FMNL1O95466 1100 aaPredicted RBP17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 CTDNEP1O95476 244 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 ERCC3P19447 782 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 COPB2P35606 906 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 KIF22Q14807 665 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 HSCBQ8IWL3 235 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 SHCBP1Q8NEM2 672 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 ZNF296Q8WUU4 475 aaPredicted RBP17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 EFCC1Q9HA90 598 aa17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 CWC22Q9HCG8 908 aaKnown RBP17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
RPRD1A-208ENST00000589050 K7ELQ4 463 aaPredicted RBP17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 DTNBO60941 627 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 MAPK4P31152 587 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 LACTBP83111 547 aaPredicted RBP17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 TRAF1Q13077 416 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 TKFCQ3LXA3 575 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 NSUN7Q8NE18 718 aaKnown RBP17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 TRERF1Q96PN7 1200 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 MROH8Q9H579 483 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 RNF146Q9NTX7 359 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 PCDHA1Q9Y5I3 950 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 ABCB11O95342 1321 aa17.88■□□□□ 0.45
RPRD1A-208ENST00000589050 PTPDC1A2A3K4 754 aa17.87■□□□□ 0.45
RPRD1A-208ENST00000589050 HSPA8P11142 646 aaKnown RBP17.87■□□□□ 0.45
RPRD1A-208ENST00000589050 CTCFP49711 727 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms