RNA–Protein interactions for RNA: ENST00000587700.1

RFX2-209, Transcript of regulatory factor X2, human

TSL 2

Gene RFX2, Length 2,376 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-209	ENST00000587700	PYM1	Q9BRP8	204 aa	Known RBP	10.43	□□□□□ -0.74
RFX2-209	ENST00000587700	LZTFL1	Q9NQ48	299 aa		10.43	□□□□□ -0.74
RFX2-209	ENST00000587700	TFCP2L1	Q9NZI6	479 aa		10.43	□□□□□ -0.74
RFX2-209	ENST00000587700	L1RE1	Q9UN81	338 aa		10.43	□□□□□ -0.74
RFX2-209	ENST00000587700	PPP1R3G	B7ZBB8	358 aa		10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	GNPAT	O15228	680 aa		10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	MFSD10	Q14728	455 aa		10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	USP49	Q70CQ1	688 aa		10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	NUP133	Q8WUM0	1156 aa		10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	SMARCC1	Q92922	1105 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	FAM84B	Q96KN1	310 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	NAPG	Q99747	312 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	IRX2	Q9BZI1	471 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	CABP5	Q9NP86	173 aa		10.42	□□□□□ -0.74
RFX2-209	ENST00000587700	hCG_1642624	A0A1W2PR95	340 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	RPS6KA5	O75582	802 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	GYPC	P04921	128 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	CD44	P16070	742 aa	Known RBP	10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	ACTN2	P35609	894 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	TXNRD3	Q86VQ6	643 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.41	□□□□□ -0.74
RFX2-209	ENST00000587700		A0A087X0B3	334 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	CTAGE15	A4D2H0	777 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	IVL	P07476	585 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	CTAGE8	P0CG41	777 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	CASP14	P31944	242 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	KRT2	P35908	639 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	MCCD1	P59942	119 aa	Predicted RBP	10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	AKAP17A	Q02040	695 aa	Known RBP	10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	PPARA	Q07869	468 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	CLEC4G	Q6UXB4	293 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	CYP26C1	Q6V0L0	522 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	CTAGE6	Q86UF2	777 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	CTAGE4	Q8IX94	777 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	SLC35F6	Q8N357	371 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	MORC4	Q8TE76	937 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	PHF20	Q9BVI0	1012 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	ACBD3	Q9H3P7	528 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	PUF60	Q9UHX1	559 aa	Known RBP	10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	ZNF804B	A4D1E1	1349 aa		10.41	□□□□□ -0.74
RFX2-209	ENST00000587700	MAGEB6P1	A0A0J9YX57	407 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	PRPF3	O43395	683 aa	Known RBP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	ABL2	P42684	1182 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	TAGLN	Q01995	201 aa	Known RBP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	SEC23A	Q15436	765 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	PNKP	Q96T60	521 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	BSDC1	Q9NW68	430 aa	Predicted RBP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	RWDD2A	Q9UIY3	292 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	ANAPC4	Q9UJX5	808 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	BCOR	Q6W2J9	1755 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	RECK	O95980	971 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	ARHGAP25	P42331	645 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	LMAN1	P49257	510 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	FXR1	P51114	621 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	SF3B3	Q15393	1217 aa	Known RBP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	KLHL10	Q6JEL2	608 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	WDR93	Q6P2C0	686 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	EFCAB3	Q8N7B9	438 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	ANKRD20A12P	Q8NF67	263 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	FAM71B	Q8TC56	605 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	CPLX3	Q8WVH0	158 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	SYMPK	Q92797	1274 aa	Known RBP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	RIOK1	Q9BRS2	568 aa	Known RBP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	UBAC1	Q9BSL1	405 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	PDE11A	Q9HCR9	933 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	ABCB6	Q9NP58	842 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	ABHD10	Q9NUJ1	306 aa		10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	TRPC5	Q9UL62	973 aa	Predicted RBP	10.4	□□□□□ -0.74
RFX2-209	ENST00000587700	PRDX5	P30044	214 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	AFM	P43652	599 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	STX17	P56962	302 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	ERVK-24	P63145	666 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	AMPD2	Q01433	879 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	GRIPAP1	Q4V328	841 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	CAVIN4	Q5BKX8	364 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	LEKR1	Q6ZMV7	388 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	EPSTI1	Q96J88	318 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	SETDB2	Q96T68	719 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	ZSWIM4	Q9H7M6	989 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	VIPAS39	Q9H9C1	493 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	BRMS1	Q9HCU9	246 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	MED4	Q9NPJ6	270 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	RBM28	Q9NW13	759 aa	Known RBP	10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	NMT2	O60551	498 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	ATP2B1	P20020	1258 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	MCM3	P25205	808 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	COPB1	P53618	953 aa	Known RBP	10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	RPS8	P62241	208 aa	Known RBP	10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	ATP2C1	P98194	919 aa	Predicted RBP	10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	FUT2	Q10981	343 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	KRT31	Q15323	416 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	PKN1	Q16512	942 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	IFNL1	Q8IU54	200 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	MTMR14	Q8NCE2	650 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	ESR2	Q92731	530 aa		10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	CCNL1	Q9UK58	526 aa	Predicted RBP	10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	CIC	Q96RK0	1608 aa	Predicted RBP	10.39	□□□□□ -0.75
RFX2-209	ENST00000587700	TNKS	O95271	1327 aa		10.38	□□□□□ -0.75
RFX2-209	ENST00000587700		A0A0U1RQJ8	604 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms