RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 CCDC34Q96HJ3 373 aa25.35■■□□□ 1.65
CIRBP-208ENST00000586548 EPSTI1Q96J88 318 aa25.35■■□□□ 1.65
CIRBP-208ENST00000586548 WNT10BO00744 389 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 SLC16A2P36021 539 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 LONP1P36776 959 aaKnown RBP25.34■■□□□ 1.65
CIRBP-208ENST00000586548 ZNF280AP59817 542 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-208ENST00000586548 POSTNQ15063 836 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 BECN2A8MW95 431 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 ESPNB1AK53 854 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 USP17L10C9JJH3 530 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 F5H6K3 240 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 BIN1O00499 593 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 KLRC3Q07444 240 aa25.34■■□□□ 1.65
CIRBP-208ENST00000586548 ORC2Q13416 577 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-208ENST00000586548 DHX40Q8IX18 779 aaKnown RBP25.34■■□□□ 1.65
CIRBP-208ENST00000586548 PYM1Q9BRP8 204 aaKnown RBP25.34■■□□□ 1.65
CIRBP-208ENST00000586548 PPP1R11O60927 126 aaPredicted RBP25.33■■□□□ 1.65
CIRBP-208ENST00000586548 IL17AQ16552 155 aa25.33■■□□□ 1.65
CIRBP-208ENST00000586548 NEK8Q86SG6 692 aa25.33■■□□□ 1.65
CIRBP-208ENST00000586548 PDILTQ8N807 584 aa25.33■■□□□ 1.65
CIRBP-208ENST00000586548 RIC8AQ9NPQ8 531 aa25.33■■□□□ 1.65
CIRBP-208ENST00000586548 RAD21O60216 631 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 PTMAP06454 111 aaKnown RBP25.32■■□□□ 1.64
CIRBP-208ENST00000586548 PRPHP41219 470 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 NBPF9Q3BBW0 867 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 TMEM39BQ9GZU3 492 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 PCDHA5Q9Y5H7 936 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 A0A087X0B3 334 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 NDUFB10O96000 172 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 TNNI2P48788 182 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 ZSCAN30Q86W11 494 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 ARHGEF10LQ9HCE6 1279 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 BIN2Q9UBW5 565 aaPredicted RBP25.32■■□□□ 1.64
CIRBP-208ENST00000586548 PGAP2Q9UHJ9 254 aa25.32■■□□□ 1.64
CIRBP-208ENST00000586548 FOXN1O15353 648 aa25.31■■□□□ 1.64
CIRBP-208ENST00000586548 SLFN14P0C7P3 912 aa25.31■■□□□ 1.64
CIRBP-208ENST00000586548 NT5DC1Q5TFE4 455 aa25.31■■□□□ 1.64
CIRBP-208ENST00000586548 JAKMIP3Q5VZ66 844 aa25.31■■□□□ 1.64
CIRBP-208ENST00000586548 SARM1Q6SZW1 724 aa25.31■■□□□ 1.64
CIRBP-208ENST00000586548 AOPEPQ8N6M6 819 aa25.31■■□□□ 1.64
CIRBP-208ENST00000586548 DHX58Q96C10 678 aa25.31■■□□□ 1.64
CIRBP-208ENST00000586548 ZBTB21Q9ULJ3 1066 aa25.31■■□□□ 1.64
CIRBP-208ENST00000586548 RASSF7Q02833 373 aa25.3■■□□□ 1.64
CIRBP-208ENST00000586548 DTHD1Q6ZMT9 781 aa25.3■■□□□ 1.64
CIRBP-208ENST00000586548 TBCKQ8TEA7 893 aa25.3■■□□□ 1.64
CIRBP-208ENST00000586548 CUL5Q93034 780 aa25.3■■□□□ 1.64
CIRBP-208ENST00000586548 GLT8D2Q9H1C3 349 aa25.3■■□□□ 1.64
CIRBP-208ENST00000586548 TMEM60Q9H2L4 133 aa25.3■■□□□ 1.64
CIRBP-208ENST00000586548 SHTN1A0MZ66 631 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 BMP3P12645 472 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 MAP3K10Q02779 954 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 QRICH1Q2TAL8 776 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 DPF2Q92785 391 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 GOLGB1Q14789 3259 aaKnown RBP25.29■■□□□ 1.64
CIRBP-208ENST00000586548 A0A1W2PRG0 241 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 FZD9O00144 591 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 TXLNAP40222 546 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 SARSP49591 514 aaKnown RBP25.29■■□□□ 1.64
CIRBP-208ENST00000586548 LETM2Q2VYF4 491 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 SH3RF1Q7Z6J0 888 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 SMARCE1Q969G3 411 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 TMEM260Q9NX78 707 aa25.29■■□□□ 1.64
CIRBP-208ENST00000586548 CCNT1O60563 726 aaKnown RBP25.28■■□□□ 1.64
CIRBP-208ENST00000586548 PRR29P0C7W0 189 aa25.28■■□□□ 1.64
CIRBP-208ENST00000586548 CLK2P49760 499 aaKnown RBP25.28■■□□□ 1.64
CIRBP-208ENST00000586548 MRPL12P52815 198 aaKnown RBP25.28■■□□□ 1.64
CIRBP-208ENST00000586548 TNFAIP1Q13829 316 aa25.28■■□□□ 1.64
CIRBP-208ENST00000586548 CDC37Q16543 378 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-208ENST00000586548 BTNL9Q6UXG8 535 aa25.28■■□□□ 1.64
CIRBP-208ENST00000586548 PLA2G4DQ86XP0 818 aa25.28■■□□□ 1.64
CIRBP-208ENST00000586548 TRIML1Q8N9V2 468 aa25.28■■□□□ 1.64
CIRBP-208ENST00000586548 RRAGDQ9NQL2 400 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-208ENST00000586548 OR52Z1P0C646 297 aa25.27■■□□□ 1.64
CIRBP-208ENST00000586548 ZNF75DP51815 510 aa25.27■■□□□ 1.64
CIRBP-208ENST00000586548 E2F4Q16254 413 aa25.27■■□□□ 1.64
CIRBP-208ENST00000586548 CDAN1Q8IWY9 1227 aa25.27■■□□□ 1.64
CIRBP-208ENST00000586548 IQUBQ8NA54 791 aa25.27■■□□□ 1.64
CIRBP-208ENST00000586548 SPATA20Q8TB22 786 aa25.27■■□□□ 1.64
CIRBP-208ENST00000586548 TRIM5Q9C035 493 aa25.27■■□□□ 1.64
CIRBP-208ENST00000586548 TMX2Q9Y320 296 aa25.27■■□□□ 1.64
CIRBP-208ENST00000586548 SMTNL1A8MU46 457 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 IKBKBO14920 756 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 NEMFO60524 1076 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 SMC2O95347 1197 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 GMPSP49915 693 aaPredicted RBP25.26■■□□□ 1.63
CIRBP-208ENST00000586548 SYDE2Q5VT97 1194 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.26■■□□□ 1.63
CIRBP-208ENST00000586548 NLGN2Q8NFZ4 835 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 NUP88Q99567 741 aaPredicted RBP25.26■■□□□ 1.63
CIRBP-208ENST00000586548 GOPCQ9HD26 462 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 MAN1B1Q9UKM7 699 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 CAP2P40123 477 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 PRELPP51888 382 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 ISM2Q6H9L7 571 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 GRAMD1CQ8IYS0 662 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 PAGE5Q96GU1 130 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 PSTPIP2Q9H939 334 aa25.26■■□□□ 1.63
CIRBP-208ENST00000586548 TMEM232C9JQI7 657 aa25.25■■□□□ 1.63
CIRBP-208ENST00000586548 RASA3Q14644 834 aa25.25■■□□□ 1.63
CIRBP-208ENST00000586548 MICALL2Q8IY33 904 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms