RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
VMP1-203ENST00000586245 ADGRA2Q96PE1 1338 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 RLFQ13129 1914 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 ICAM1P05362 532 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 ERVK-9P63128 1117 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 ERVK-24P63145 666 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 CCNA1P78396 465 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 FUT2Q10981 343 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 TRAF1Q13077 416 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 TMEM132BQ14DG7 1078 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 NTRK3Q16288 839 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 FAM110CQ1W6H9 321 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 SLC35G1Q2M3R5 365 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 QRICH1Q2TAL8 776 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 C17orf99Q6UX52 265 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 FBXO11Q86XK2 927 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 REPS2Q8NFH8 660 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 PHKBQ93100 1093 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 MTMR8Q96EF0 704 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 SLC26A6Q9BXS9 759 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 TEX13BQ9BXU2 312 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.12
VMP1-203ENST00000586245 SPATC1LQ9H0A9 340 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 TXNRD2Q9NNW7 524 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 WBP1LQ9NX94 342 aa15.77■□□□□ 0.12
VMP1-203ENST00000586245 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.12
VMP1-203ENST00000586245 PARP14Q460N5 1801 aa15.77■□□□□ 0.11
VMP1-203ENST00000586245 ATP2A1O14983 1001 aa15.76■□□□□ 0.11
VMP1-203ENST00000586245 CNMDO75829 334 aa15.76■□□□□ 0.11
VMP1-203ENST00000586245 BCRP11274 1271 aa15.76■□□□□ 0.11
VMP1-203ENST00000586245 STAT3P40763 770 aa15.76■□□□□ 0.11
VMP1-203ENST00000586245 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
VMP1-203ENST00000586245 SNRNP48Q6IEG0 339 aaKnown RBP15.76■□□□□ 0.11
VMP1-203ENST00000586245 CCAR1Q8IX12 1150 aaKnown RBP15.76■□□□□ 0.11
VMP1-203ENST00000586245 JMYQ8N9B5 988 aa15.76■□□□□ 0.11
VMP1-203ENST00000586245 LLPHQ9BRT6 129 aaKnown RBP15.76■□□□□ 0.11
VMP1-203ENST00000586245 AMNQ9BXJ7 453 aa15.76■□□□□ 0.11
VMP1-203ENST00000586245 ZNF214Q9UL59 606 aaPredicted RBP15.76■□□□□ 0.11
VMP1-203ENST00000586245 CCPG1Q9ULG6 757 aa15.76■□□□□ 0.11
VMP1-203ENST00000586245 A0A0G2JMZ2 1700 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
VMP1-203ENST00000586245 PEX10O60683 326 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 FMNL1O95466 1100 aaPredicted RBP15.75■□□□□ 0.11
VMP1-203ENST00000586245 SLC25A27O95847 323 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 COPB2P35606 906 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 ST3GAL1Q11201 340 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 TKFCQ3LXA3 575 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 AGBL1Q96MI9 1066 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 R3HDMLQ9H3Y0 253 aa15.75■□□□□ 0.11
VMP1-203ENST00000586245 CWC22Q9HCG8 908 aaKnown RBP15.75■□□□□ 0.11
VMP1-203ENST00000586245 ZNF536O15090 1300 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 STK36Q9NRP7 1315 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 PPFIA3O75145 1194 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 CTDNEP1O95476 244 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 ALAS1P13196 640 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 BECN1Q14457 450 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 Q3C1V9 767 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 USH1GQ495M9 461 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 NCAPG2Q86XI2 1143 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 RIOX2Q8IUF8 465 aa15.74■□□□□ 0.11
VMP1-203ENST00000586245 NSUN7Q8NE18 718 aaKnown RBP15.74■□□□□ 0.11
VMP1-203ENST00000586245 MOV10L1Q9BXT6 1211 aaKnown RBP15.74■□□□□ 0.11
VMP1-203ENST00000586245 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
VMP1-203ENST00000586245 ABCB11O95342 1321 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 hCG_1984214I3L0E3 225 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 DEXIO95424 95 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 SCG2P13521 617 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 ANP32AP39687 249 aaKnown RBP15.73■□□□□ 0.11
VMP1-203ENST00000586245 HMGN5P82970 282 aaKnown RBP15.73■□□□□ 0.11
VMP1-203ENST00000586245 SP3Q02447 781 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 CUL4AQ13619 759 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 PFKFB3Q16875 520 aaPredicted RBP15.73■□□□□ 0.11
VMP1-203ENST00000586245 WDR78Q5VTH9 848 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 HEATR3Q7Z4Q2 680 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 ZNF713Q8N859 430 aaPredicted RBP15.73■□□□□ 0.11
VMP1-203ENST00000586245 SHCBP1Q8NEM2 672 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 WASF1Q92558 559 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 HOMER2Q9NSB8 354 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 ORC3Q9UBD5 711 aaPredicted RBP15.73■□□□□ 0.11
VMP1-203ENST00000586245 FBXO40Q9UH90 709 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 MRPL11Q9Y3B7 192 aaKnown RBP15.73■□□□□ 0.11
VMP1-203ENST00000586245 PCDHA1Q9Y5I3 950 aa15.73■□□□□ 0.11
VMP1-203ENST00000586245 CEP350Q5VT06 3117 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 GPR25O00155 361 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 JAK2O60674 1132 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 PPP1R11O60927 126 aaPredicted RBP15.72■□□□□ 0.11
VMP1-203ENST00000586245 ERCC3P19447 782 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 MAPK4P31152 587 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 KIF22Q14807 665 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 CHST13Q8NET6 341 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 SMARCC2Q8TAQ2 1214 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 COA7Q96BR5 231 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 DDX11Q96FC9 970 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 TRERF1Q96PN7 1200 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 MROH8Q9H579 483 aa15.72■□□□□ 0.11
VMP1-203ENST00000586245 RNF146Q9NTX7 359 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms