RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 BICDL1Q6ZP65 573 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TMEM60Q9H2L4 133 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MAD2L2Q9UI95 211 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MYO6Q9UM54 1294 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PCDHA6Q9UN73 950 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 LUC7L2Q9Y383 392 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PCDHA8Q9Y5H6 950 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PP2D1A8MPX8 630 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 RGL2O15211 777 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TUBBP07437 444 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 UBA7P41226 1012 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 LINC00116Q8NCU8 138 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 GIMAP8Q8ND71 665 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CAPN11Q9UMQ6 739 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 LAD1O00515 517 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PSMA7O14818 248 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 ZBTB22O15209 634 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 HNRNPH2P55795 449 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 STIM1Q13586 685 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TBC1D9BQ66K14 1250 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CCDC148Q8NFR7 591 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 RASSF8Q8NHQ8 419 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 HAUS4Q9H6D7 363 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 ABCB6Q9NP58 842 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PSMD14O00487 310 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 KCNQ2O43526 872 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 RHOXF2BP0C7M4 288 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SLC35G1Q2M3R5 365 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SLC4A8Q2Y0W8 1093 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 WDR59Q6PJI9 974 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 NEK11Q8NG66 645 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SECISBP2LQ93073 1101 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 NLRP3Q96P20 1036 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 RHOXF2Q9BQY4 288 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 ADAM21Q9UKJ8 722 aa15.94■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CYTH3O43739 400 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PRPHP41219 470 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 VSNL1P62760 191 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MCM6Q14566 821 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 INF2Q27J81 1249 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SPTY2D1Q68D10 685 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TTI2Q6NXR4 508 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 DZIP1Q86YF9 867 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 EXOC4Q96A65 974 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 BARHL2Q9NY43 387 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PSD3Q9NYI0 1048 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 GUCA1BQ9UMX6 200 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 DNM2P50570 870 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CCDC178Q5BJE1 867 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TRAPPC11Q7Z392 1133 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TXNRD3Q86VQ6 643 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 NOA1Q8NC60 698 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 NOC3LQ8WTT2 800 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TRIM47Q96LD4 638 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PDE11AQ9HCR9 933 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TRIM10Q9UDY6 481 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 NRAPQ86VF7 1730 aa15.93■□□□□ 0.14
CDK5RAP3-237ENST00000585163 ROBO3Q96MS0 1386 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 ZNF831Q5JPB2 1677 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 STXBP3O00186 592 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MEA1Q16626 185 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 NCAPH2Q6IBW4 605 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 ZNF662Q6ZS27 426 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 LRRC15Q8TF66 581 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 DYNLL2Q96FJ2 89 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 DHTKD1Q96HY7 919 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 NYXQ9GZU5 481 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 GBP3Q9H0R5 595 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CUEDC2Q9H467 287 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TCP11L1Q9NUJ3 509 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 JAG2Q9Y219 1238 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SRGNP10124 158 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 HERVK_113P62684 666 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TSR1Q2NL82 804 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 HEATR3Q7Z4Q2 680 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 SUGCTQ9HAC7 445 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MAGEF1Q9HAY2 307 aa15.92■□□□□ 0.14
CDK5RAP3-237ENST00000585163 USP17L3A6NCW0 530 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 USP17L4A6NCW7 530 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PES1O00541 588 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 GYS2P54840 703 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 WDR93Q6P2C0 686 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 USP17L1Q7RTZ2 530 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 AK8Q96MA6 479 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PLIN2Q99541 437 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TTYH3Q9C0H2 523 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MKNK2Q9HBH9 465 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 FLT1P17948 1338 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 AHDC1Q5TGY3 1603 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 PALM3A6NDB9 673 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 EIF3JO75822 258 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 DUSP9Q99956 384 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TUBGCP2Q9BSJ2 902 aa15.91■□□□□ 0.14
CDK5RAP3-237ENST00000585163 B4DLN1 442 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TSPY3P0CV98 308 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TSPY8P0CW00 308 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 KRT83P78385 493 aa15.9■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms