RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 LAMA2P24043 3122 aaKnown RBP17.83■□□□□ 0.44
VAPA-209ENST00000585042 MROH7Q68CQ1 1323 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 SYNRGQ9UMZ2 1314 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 RAG1P15918 1043 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 MX1P20591 662 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 NKX3-2P78367 333 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 C9orf50Q5SZB4 431 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 GUCD1Q96NT3 240 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 SEC62Q99442 399 aaKnown RBP17.82■□□□□ 0.44
VAPA-209ENST00000585042 STARD7Q9NQZ5 370 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 TMEM39AQ9NV64 488 aa17.82■□□□□ 0.44
VAPA-209ENST00000585042 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.82■□□□□ 0.44
VAPA-209ENST00000585042 TMEM232C9JQI7 657 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 SLC4A3P48751 1232 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 GJA9P57773 515 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 FAAP100Q0VG06 881 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 RCSD1Q6JBY9 416 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 LRRC47Q8N1G4 583 aaKnown RBP17.81■□□□□ 0.44
VAPA-209ENST00000585042 GLT1D1Q96MS3 346 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 UPF3AQ9H1J1 476 aaKnown RBP17.81■□□□□ 0.44
VAPA-209ENST00000585042 SEMA6BQ9H3T3 888 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 ACAD9Q9H845 621 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
VAPA-209ENST00000585042 ANAPC4Q9UJX5 808 aa17.81■□□□□ 0.44
VAPA-209ENST00000585042 ZHX1Q9UKY1 873 aaPredicted RBP17.81■□□□□ 0.44
VAPA-209ENST00000585042 TMEM265A0A087WTH1 108 aa17.8■□□□□ 0.44
VAPA-209ENST00000585042 PQBP1O60828 265 aaKnown RBP17.8■□□□□ 0.44
VAPA-209ENST00000585042 ITGB8P26012 769 aa17.8■□□□□ 0.44
VAPA-209ENST00000585042 SLC1A4P43007 532 aa17.8■□□□□ 0.44
VAPA-209ENST00000585042 CDK7P50613 346 aa17.8■□□□□ 0.44
VAPA-209ENST00000585042 CCDC144BQ3MJ40 725 aa17.8■□□□□ 0.44
VAPA-209ENST00000585042 FGD4Q96M96 766 aa17.8■□□□□ 0.44
VAPA-209ENST00000585042 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.8■□□□□ 0.44
VAPA-209ENST00000585042 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
VAPA-209ENST00000585042 ASB14A6NK59 587 aa17.79■□□□□ 0.44
VAPA-209ENST00000585042 NOVP48745 357 aa17.79■□□□□ 0.44
VAPA-209ENST00000585042 FPGSQ05932 587 aa17.79■□□□□ 0.44
VAPA-209ENST00000585042 ALX1Q15699 326 aa17.79■□□□□ 0.44
VAPA-209ENST00000585042 ARMCX2Q7L311 632 aa17.79■□□□□ 0.44
VAPA-209ENST00000585042 FAM133AQ8N9E0 248 aa17.79■□□□□ 0.44
VAPA-209ENST00000585042 EVI5LQ96CN4 794 aa17.79■□□□□ 0.44
VAPA-209ENST00000585042 TSPY2A6NKD2 308 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 TIMP1P01033 207 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 ASGR1P07306 291 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 FGRP09769 529 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 C6orf222P0C671 652 aaPredicted RBP17.78■□□□□ 0.44
VAPA-209ENST00000585042 MCCP23508 829 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 GNASQ5JWF2 1037 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 CCDC144CPQ8IYA2 1237 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 OTUD7AQ8TE49 926 aaPredicted RBP17.78■□□□□ 0.44
VAPA-209ENST00000585042 LENG1Q96BZ8 264 aaPredicted RBP17.78■□□□□ 0.44
VAPA-209ENST00000585042 SEZ6LQ9BYH1 1024 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 KATNBL1Q9H079 304 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 HELLSQ9NRZ9 838 aa17.78■□□□□ 0.44
VAPA-209ENST00000585042 ZNF536O15090 1300 aa17.77■□□□□ 0.44
VAPA-209ENST00000585042 ORC4O43929 436 aa17.77■□□□□ 0.44
VAPA-209ENST00000585042 IKQ13123 557 aaPredicted RBP17.77■□□□□ 0.44
VAPA-209ENST00000585042 CCDC174Q6PII3 467 aa17.77■□□□□ 0.44
VAPA-209ENST00000585042 RNPC3Q96LT9 517 aaKnown RBP17.77■□□□□ 0.44
VAPA-209ENST00000585042 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
VAPA-209ENST00000585042 CDX2Q99626 313 aaPredicted RBP17.77■□□□□ 0.44
VAPA-209ENST00000585042 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.44
VAPA-209ENST00000585042 STX8Q9UNK0 236 aa17.77■□□□□ 0.44
VAPA-209ENST00000585042 A0A0U1RQG5 324 aaPredicted RBP17.76■□□□□ 0.43
VAPA-209ENST00000585042 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.76■□□□□ 0.43
VAPA-209ENST00000585042 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.76■□□□□ 0.43
VAPA-209ENST00000585042 ARVCFO00192 962 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 FOXP2O15409 715 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 CABYRO75952 493 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 CNTN2Q02246 1040 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 ANKRD45Q5TZF3 282 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 MFSD5Q6N075 450 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 CCDC129Q6ZRS4 1044 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 VTI1AQ96AJ9 217 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 AGBL1Q96MI9 1066 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 TRERF1Q96PN7 1200 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 A1CFQ9NQ94 594 aaKnown RBP17.76■□□□□ 0.43
VAPA-209ENST00000585042 HOMER2Q9NSB8 354 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 RNF146Q9NTX7 359 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 TBX21Q9UL17 535 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 Q9Y3F1 56 aa17.76■□□□□ 0.43
VAPA-209ENST00000585042 LOC102724159A0A0B4J2E5 919 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 MYADML2A6NDP7 307 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 TLR3O15455 904 aaKnown RBP17.75■□□□□ 0.43
VAPA-209ENST00000585042 ADCY6O43306 1168 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 EPHB4P54760 987 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 TNFAIP2Q03169 654 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 CTDSPL2Q05D32 466 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 PWP2Q15269 919 aaKnown RBP17.75■□□□□ 0.43
VAPA-209ENST00000585042 IQSEC1Q6DN90 963 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.75■□□□□ 0.434e-6■□□□□ 8.1
VAPA-209ENST00000585042 DCAF4Q8WV16 495 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 TCP11L1Q9NUJ3 509 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 PRR12Q9ULL5 1215 aa17.75■□□□□ 0.43
VAPA-209ENST00000585042 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
VAPA-209ENST00000585042 SOWAHBA6NEL2 793 aa17.74■□□□□ 0.43
VAPA-209ENST00000585042 CTAGE5O15320 804 aa17.74■□□□□ 0.43
VAPA-209ENST00000585042 RANBP6O60518 1105 aaKnown RBP17.74■□□□□ 0.43
VAPA-209ENST00000585042 ALAS1P13196 640 aa17.74■□□□□ 0.43
VAPA-209ENST00000585042 PDE1AP54750 535 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms