RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 TRIM75PA6NK02 468 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 ESPNB1AK53 854 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 PRPF40AO75400 957 aaKnown RBP9.43□□□□□ -0.9
GGA3-218ENST00000584243 IGKV5-2P06315 115 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 CASTP20810 708 aaKnown RBP9.43□□□□□ -0.9
GGA3-218ENST00000584243 MSNP26038 577 aaKnown RBP9.43□□□□□ -0.9
GGA3-218ENST00000584243 NUBP1P53384 320 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 Q3C1V9 767 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 CCDC152Q4G0S7 254 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 CCDC183Q5T5S1 534 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 MFSD14CQ5VZR4 134 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 CAVIN1Q6NZI2 390 aaKnown RBP9.43□□□□□ -0.9
GGA3-218ENST00000584243 BLOC1S2Q6QNY1 142 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 GPR142Q7Z601 462 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 ZSCAN30Q86W11 494 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 SCAND2PQ9GZW5 306 aaPredicted RBP9.43□□□□□ -0.9
GGA3-218ENST00000584243 ASCC2Q9H1I8 757 aaPredicted RBP9.43□□□□□ -0.9
GGA3-218ENST00000584243 HELLSQ9NRZ9 838 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 PNMA3Q9UL41 463 aa9.43□□□□□ -0.9
GGA3-218ENST00000584243 A0A1W2PQ45 241 aaPredicted RBP9.42□□□□□ -0.9
GGA3-218ENST00000584243 A0A1W2PQY0 241 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 FGBP02675 491 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 HMGN5P82970 282 aaKnown RBP9.42□□□□□ -0.9
GGA3-218ENST00000584243 MAP2K5Q13163 448 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
GGA3-218ENST00000584243 TNNI3KQ59H18 835 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 MCTP2Q6DN12 878 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 SCYL3Q8IZE3 742 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 CRIPAKQ8N1N5 446 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 ZGPATQ8N5A5 531 aaKnown RBP9.42□□□□□ -0.9
GGA3-218ENST00000584243 HOOK2Q96ED9 719 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 MYD88Q99836 296 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 HAUS7Q99871 368 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 LMCD1Q9NZU5 365 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 CCDC39Q9UFE4 941 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 CTNNA3Q9UI47 895 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 PALD1Q9ULE6 856 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 FPGT-TNNI3KV9GXZ4 949 aa9.42□□□□□ -0.9
GGA3-218ENST00000584243 TNKSO95271 1327 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 H7C1W4 665 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 F13A1P00488 732 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 SLURP2P0DP57 97 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 ATP2A2P16615 1042 aaKnown RBP9.41□□□□□ -0.9
GGA3-218ENST00000584243 ATXN1P54253 815 aaKnown RBP9.41□□□□□ -0.9
GGA3-218ENST00000584243 AK2P54819 239 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 KRT85P78386 507 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 MCMDC2Q4G0Z9 681 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 CREB3L3Q68CJ9 461 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 FBXL16Q8N461 479 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 TMEM199Q8N511 208 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 TDRD7Q8NHU6 1098 aaKnown RBP9.41□□□□□ -0.9
GGA3-218ENST00000584243 NPLOC4Q8TAT6 608 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 PDLIM2Q96JY6 352 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 JAKMIP1Q96N16 626 aaKnown RBP9.41□□□□□ -0.9
GGA3-218ENST00000584243 DSCC1Q9BVC3 393 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 PLA2G12BQ9BX93 195 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 PPP1R12CQ9BZL4 782 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 TSPY26PQ9H489 355 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 ZSCAN16Q9H4T2 348 aaPredicted RBP9.41□□□□□ -0.9
GGA3-218ENST00000584243 RBM8AQ9Y5S9 174 aaKnown RBP9.41□□□□□ -0.9
GGA3-218ENST00000584243 SLC4A7Q9Y6M7 1214 aa9.41□□□□□ -0.9
GGA3-218ENST00000584243 UMODL1Q5DID0 1318 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 WDR19Q8NEZ3 1342 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 COL4A3Q01955 1670 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 DCDC2CA8MYV0 355 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 DHX16O60231 1041 aaKnown RBP9.4□□□□□ -0.9
GGA3-218ENST00000584243 RPS6KB1P23443 525 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 CYP2C18P33260 490 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 SIGLEC14Q08ET2 396 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 FKBP1CQ5VVH2 108 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 TSHZ3Q63HK5 1081 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.4□□□□□ -0.9
GGA3-218ENST00000584243 TMEM105Q8N8V8 129 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 KBTBD3Q8NAB2 608 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 JARID2Q92833 1246 aaPredicted RBP9.4□□□□□ -0.9
GGA3-218ENST00000584243 EAF2Q96CJ1 260 aaPredicted RBP9.4□□□□□ -0.9
GGA3-218ENST00000584243 EDC3Q96F86 508 aaKnown RBP9.4□□□□□ -0.9
GGA3-218ENST00000584243 ZDHHC9Q9Y397 364 aa9.4□□□□□ -0.9
GGA3-218ENST00000584243 SEPT4O43236 478 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 SYT1P21579 422 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 MAPK4P31152 587 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 DHX8Q14562 1220 aaKnown RBP9.39□□□□□ -0.91
GGA3-218ENST00000584243 COL19A1Q14993 1142 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 SMAD2Q15796 467 aaKnown RBP9.39□□□□□ -0.91
GGA3-218ENST00000584243 TMED8Q6PL24 325 aaPredicted RBP9.39□□□□□ -0.91
GGA3-218ENST00000584243 PLEKHH3Q7Z736 793 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 PROCA1Q8NCQ7 364 aaPredicted RBP9.39□□□□□ -0.91
GGA3-218ENST00000584243 KAZALD1Q96I82 304 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 ZNF512BQ96KM6 892 aaPredicted RBP9.39□□□□□ -0.91
GGA3-218ENST00000584243 MTIF3Q9H2K0 278 aaKnown RBP9.39□□□□□ -0.91
GGA3-218ENST00000584243 RBPJLQ9UBG7 517 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 CFAP45Q9UL16 551 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 NDUFB9Q9Y6M9 179 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 LAMA5O15230 3695 aa9.39□□□□□ -0.91
GGA3-218ENST00000584243 A0A1B0GUL6 1792 aa9.38□□□□□ -0.91
GGA3-218ENST00000584243 GOLGA6L6A8MZA4 724 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms