RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 ZFYP08048 801 aaPredicted RBP11.51□□□□□ -0.57
MKS1-212ENST00000583577 PTPREP23469 700 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 CAP2P40123 477 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 BACE1P56817 501 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 RHBDL3P58872 404 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 RRP1BQ14684 758 aaKnown RBP11.51□□□□□ -0.57
MKS1-212ENST00000583577 ANKRD1Q15327 319 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 CCDC183Q5T5S1 534 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 VPS53Q5VIR6 699 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 CCDC174Q6PII3 467 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 C16orf59Q7L2K0 433 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 ADGRA1Q86SQ6 560 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 MIGA1Q8NAN2 632 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 SH3RF3Q8TEJ3 882 aaPredicted RBP11.51□□□□□ -0.57
MKS1-212ENST00000583577 EVI5LQ96CN4 794 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 FSD1Q9BTV5 496 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 RBSNQ9H1K0 784 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 CD320Q9NPF0 282 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 YBX2Q9Y2T7 364 aaKnown RBP11.51□□□□□ -0.57
MKS1-212ENST00000583577 CACNA1HO95180 2353 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 CCDC171Q6TFL3 1326 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 TCRBV5S4A2TA0A5A2 114 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 SEPT4O43236 478 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 TBC1D12O60347 775 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 ACRP10323 421 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 PDCP20941 246 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 PSMA5P28066 241 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 UBE2HP62256 183 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 DYNLL1P63167 89 aaKnown RBP11.5□□□□□ -0.57
MKS1-212ENST00000583577 CCNA1P78396 465 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 FAAP100Q0VG06 881 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 PPIGQ13427 754 aaKnown RBP eCLIP11.5□□□□□ -0.57
MKS1-212ENST00000583577 HSP90AA2PQ14568 343 aaPredicted RBP11.5□□□□□ -0.57
MKS1-212ENST00000583577 UBE3CQ15386 1083 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 FAM47AQ5JRC9 791 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 PRAMEF19Q5SWL8 479 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 ZNF365Q70YC5 407 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 CHMP4CQ96CF2 233 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 TTC14Q96N46 770 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 PDCL3Q9H2J4 239 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 TMEM63CQ9P1W3 806 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 COG5Q9UP83 839 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 PHF24Q9UPV7 400 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 IVNS1ABPQ9Y6Y0 642 aa11.5□□□□□ -0.57
MKS1-212ENST00000583577 DCDC2CA8MYV0 355 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 RNF113AO15541 343 aaKnown RBP11.49□□□□□ -0.57
MKS1-212ENST00000583577 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
MKS1-212ENST00000583577 TIMP1P01033 207 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 HOXC6P09630 235 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 ZSCAN22P10073 491 aaPredicted RBP11.49□□□□□ -0.57
MKS1-212ENST00000583577 RASIP1Q5U651 963 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 MFSD5Q6N075 450 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 DPP9Q86TI2 863 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 GTF3C2Q8WUA4 911 aaPredicted RBP11.49□□□□□ -0.57
MKS1-212ENST00000583577 TGFBRAP1Q8WUH2 860 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 CRNKL1Q9BZJ0 848 aaKnown RBP11.49□□□□□ -0.57
MKS1-212ENST00000583577 FAM186AA6NE01 2351 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 EPG5Q9HCE0 2579 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 SIPA1L1O43166 1804 aa11.49□□□□□ -0.57
MKS1-212ENST00000583577 RFXAPO00287 272 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 GTPBP6O43824 516 aaPredicted RBP11.48□□□□□ -0.57
MKS1-212ENST00000583577 CNMDO75829 334 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 CSF2RAP15509 400 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 USP5P45974 858 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 PKP1Q13835 747 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 GRB14Q14449 540 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 RNF20Q5VTR2 975 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 PPP2R2DQ66LE6 453 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 APPBP2Q92624 585 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 PHOX2BQ99453 314 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 RIOK1Q9BRS2 568 aaKnown RBP11.48□□□□□ -0.57
MKS1-212ENST00000583577 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 LSG1Q9H089 658 aaKnown RBP11.48□□□□□ -0.57
MKS1-212ENST00000583577 DIAPH3Q9NSV4 1193 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 RABGAP1Q9Y3P9 1069 aa11.48□□□□□ -0.57
MKS1-212ENST00000583577 TPRP12270 2363 aaKnown RBP11.47□□□□□ -0.57
MKS1-212ENST00000583577 ELP1O95163 1332 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 A0A1W2PQ45 241 aaPredicted RBP11.47□□□□□ -0.57
MKS1-212ENST00000583577 A0A1W2PQY0 241 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 SYCE3A1L190 88 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 C19orf81C9J6K1 198 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 USP17L10C9JJH3 530 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 STX6O43752 255 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 MBD4O95243 580 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 CAVIN2O95810 425 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 RABGGTBP53611 331 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 HMGN5P82970 282 aaKnown RBP11.47□□□□□ -0.57
MKS1-212ENST00000583577 SLFNL1Q499Z3 407 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 KRT40Q6A162 431 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 PSRC1Q6PGN9 363 aaPredicted RBP11.47□□□□□ -0.57
MKS1-212ENST00000583577 MAPKAPK5Q8IW41 473 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 HLA-CQ95604 372 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 ARMT1Q9H993 441 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 XPNPEP3Q9NQH7 507 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 SMC3Q9UQE7 1217 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 SNX14Q9Y5W7 946 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 MTCH2Q9Y6C9 303 aa11.47□□□□□ -0.57
MKS1-212ENST00000583577 FLT1P17948 1338 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 DYNC1I1O14576 645 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms