RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 MYPNQ86TC9 1320 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 WDR33Q9C0J8 1336 aaKnown RBP11.04□□□□□ -0.64
RFFL-210ENST00000582308 PNMA6FA0A0J9YX94 578 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 ZBTB5O15062 677 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 PEX10O60683 326 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 DEXIO95424 95 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 HSP90AA1P07900 732 aaKnown RBP11.03□□□□□ -0.64
RFFL-210ENST00000582308 CYP2C8P10632 490 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 SCG2P13521 617 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 HERVK_113P62684 666 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
RFFL-210ENST00000582308 AKAP17AQ02040 695 aaKnown RBP11.03□□□□□ -0.64
RFFL-210ENST00000582308 SREBF2Q12772 1141 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
RFFL-210ENST00000582308 PFKFB3Q16875 520 aaPredicted RBP11.03□□□□□ -0.64
RFFL-210ENST00000582308 LBX2Q6XYB7 198 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 SHISA4Q96DD7 197 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 ZCCHC17Q9NP64 241 aaKnown RBP11.03□□□□□ -0.64
RFFL-210ENST00000582308 ZNF536O15090 1300 aa11.03□□□□□ -0.64
RFFL-210ENST00000582308 THSD7BQ9C0I4 1608 aa11.02□□□□□ -0.64
RFFL-210ENST00000582308 ZBED4O75132 1171 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 FDX1P10109 184 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 TAL1P17542 331 aaPredicted RBP11.02□□□□□ -0.65
RFFL-210ENST00000582308 TMEM132BQ14DG7 1078 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 CCDC174Q6PII3 467 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 GPKOWQ92917 476 aaPredicted RBP eCLIP11.02□□□□□ -0.65
RFFL-210ENST00000582308 ALG1Q9BT22 464 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 GJB4Q9NTQ9 266 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 RBM27Q9P2N5 1060 aaKnown RBP11.02□□□□□ -0.65
RFFL-210ENST00000582308 RBPJLQ9UBG7 517 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 SEC63Q9UGP8 760 aaKnown RBP11.02□□□□□ -0.65
RFFL-210ENST00000582308 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
RFFL-210ENST00000582308 STXBP3O00186 592 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 CNMDO75829 334 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 ICAM1P05362 532 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 MAP2K2P36507 400 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 FOSBP53539 338 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 WWC2Q6AWC2 1192 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 HEATR3Q7Z4Q2 680 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 FBXO11Q86XK2 927 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 CPXCR1Q8N123 301 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 MB21D1Q8N884 522 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 FAM184AQ8NB25 1140 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 COA7Q96BR5 231 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 AGBL1Q96MI9 1066 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 PARK7Q99497 189 aaKnown RBP11.01□□□□□ -0.65
RFFL-210ENST00000582308 RAVER2Q9HCJ3 691 aaKnown RBP11.01□□□□□ -0.65
RFFL-210ENST00000582308 TXNRD2Q9NNW7 524 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 BARHL2Q9NY43 387 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
RFFL-210ENST00000582308 ZNF214Q9UL59 606 aaPredicted RBP11.01□□□□□ -0.65
RFFL-210ENST00000582308 ADGRA2Q96PE1 1338 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 PCNTO95613 3336 aa11.01□□□□□ -0.65
RFFL-210ENST00000582308 RBBP6Q7Z6E9 1792 aaKnown RBP11□□□□□ -0.65
RFFL-210ENST00000582308 MGAMO43451 1857 aa11□□□□□ -0.65
RFFL-210ENST00000582308 ATP2A1O14983 1001 aa11□□□□□ -0.65
RFFL-210ENST00000582308 OAZ1P54368 228 aa11□□□□□ -0.65
RFFL-210ENST00000582308 TAF1CQ15572 869 aaPredicted RBP11□□□□□ -0.65
RFFL-210ENST00000582308 USH1GQ495M9 461 aa11□□□□□ -0.65
RFFL-210ENST00000582308 OTUD7BQ6GQQ9 843 aa11□□□□□ -0.65
RFFL-210ENST00000582308 REM2Q8IYK8 340 aaPredicted RBP11□□□□□ -0.65
RFFL-210ENST00000582308 SMCR8Q8TEV9 937 aaPredicted RBP11□□□□□ -0.65
RFFL-210ENST00000582308 WASF1Q92558 559 aa11□□□□□ -0.65
RFFL-210ENST00000582308 PAGR1Q9BTK6 254 aa11□□□□□ -0.65
RFFL-210ENST00000582308 AMNQ9BXJ7 453 aa11□□□□□ -0.65
RFFL-210ENST00000582308 CWC22Q9HCG8 908 aaKnown RBP11□□□□□ -0.65
RFFL-210ENST00000582308 VPS54Q9P1Q0 977 aa11□□□□□ -0.65
RFFL-210ENST00000582308 CCPG1Q9ULG6 757 aa11□□□□□ -0.65
RFFL-210ENST00000582308 RABGAP1Q9Y3P9 1069 aa11□□□□□ -0.65
RFFL-210ENST00000582308 RIPK3Q9Y572 518 aa11□□□□□ -0.65
RFFL-210ENST00000582308 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
RFFL-210ENST00000582308 PCDHA1Q9Y5I3 950 aa11□□□□□ -0.65
RFFL-210ENST00000582308 CEP350Q5VT06 3117 aa11□□□□□ -0.65
RFFL-210ENST00000582308 ADAMTS3O15072 1205 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 SYT1P21579 422 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 DDIT3P35638 169 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 STAT3P40763 770 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 GCLCP48506 637 aaPredicted RBP10.99□□□□□ -0.65
RFFL-210ENST00000582308 GUCY1B3Q02153 619 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 CRHR2Q13324 411 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 PLS1Q14651 629 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 Q3C1V9 767 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 LARP1BQ659C4 914 aaKnown RBP10.99□□□□□ -0.65
RFFL-210ENST00000582308 SNRNP48Q6IEG0 339 aaKnown RBP10.99□□□□□ -0.65
RFFL-210ENST00000582308 FBXO18Q8NFZ0 1043 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 GTF3C2Q8WUA4 911 aaPredicted RBP10.99□□□□□ -0.65
RFFL-210ENST00000582308 C8orf76Q96K31 380 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 TEX13BQ9BXU2 312 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 SPATC1LQ9H0A9 340 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 R3HDMLQ9H3Y0 253 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 SH3GLB2Q9NR46 395 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 KCNJ14Q9UNX9 436 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 KIF3AQ9Y496 699 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 MYH7BA7E2Y1 1941 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 LCTP09848 1927 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 TCHHQ07283 1943 aa10.99□□□□□ -0.65
RFFL-210ENST00000582308 PLXNB2O15031 1838 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 hCG_1984214I3L0E3 225 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms