RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 SNRNP48Q6IEG0 339 aaKnown RBP18.53■□□□□ 0.56
CCDC57-213ENST00000581625 MTMR8Q96EF0 704 aa18.53■□□□□ 0.56
CCDC57-213ENST00000581625 MOV10L1Q9BXT6 1211 aaKnown RBP18.53■□□□□ 0.56
CCDC57-213ENST00000581625 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
CCDC57-213ENST00000581625 MROH8Q9H579 483 aa18.53■□□□□ 0.56
CCDC57-213ENST00000581625 JMJD4Q9H9V9 463 aa18.53■□□□□ 0.56
CCDC57-213ENST00000581625 RAVER2Q9HCJ3 691 aaKnown RBP18.53■□□□□ 0.56
CCDC57-213ENST00000581625 PRDM10Q9NQV6 1147 aa18.53■□□□□ 0.56
CCDC57-213ENST00000581625 ZNF536O15090 1300 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 TNPO2O14787 897 aaKnown RBP18.52■□□□□ 0.56
CCDC57-213ENST00000581625 ZBTB5O15062 677 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 PLEKHA8P1O95397 391 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 Q3C1V9 767 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 CCDC174Q6PII3 467 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 CPXCR1Q8N123 301 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 CD99L2Q8TCZ2 262 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 RRP36Q96EU6 259 aaKnown RBP18.52■□□□□ 0.56
CCDC57-213ENST00000581625 PORCNQ9H237 461 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 CWC22Q9HCG8 908 aaKnown RBP18.52■□□□□ 0.56
CCDC57-213ENST00000581625 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
CCDC57-213ENST00000581625 FBXO40Q9UH90 709 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.56
CCDC57-213ENST00000581625 CNTNAP5Q8WYK1 1306 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 CYTH3O43739 400 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 PEX10O60683 326 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 ERCC3P19447 782 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 CDC27P30260 824 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 PSMC4P43686 418 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 QRICH1Q2TAL8 776 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 CPLX2Q6PUV4 134 aaKnown RBP18.51■□□□□ 0.55
CCDC57-213ENST00000581625 NBPF11Q86T75 865 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 NCAPG2Q86XI2 1143 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 SRBD1Q8N5C6 995 aaKnown RBP18.51■□□□□ 0.55
CCDC57-213ENST00000581625 SOCS4Q8WXH5 440 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 SLKQ9H2G2 1235 aaPredicted RBP18.51■□□□□ 0.55
CCDC57-213ENST00000581625 RBM27Q9P2N5 1060 aaKnown RBP18.51■□□□□ 0.55
CCDC57-213ENST00000581625 TPCN1Q9ULQ1 816 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 IVNS1ABPQ9Y6Y0 642 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 ZNF236Q9UL36 1845 aa18.51■□□□□ 0.55
CCDC57-213ENST00000581625 FMNL1O95466 1100 aaPredicted RBP18.5■□□□□ 0.55
CCDC57-213ENST00000581625 HOXD10P28358 340 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 MCM2P49736 904 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 SLC35G1Q2M3R5 365 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCDC57-213ENST00000581625 GPR142Q7Z601 462 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 HOMER1Q86YM7 354 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 CHST13Q8NET6 341 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 COA7Q96BR5 231 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 TRIM47Q96LD4 638 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 EFCC1Q9HA90 598 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 VAT1LQ9HCJ6 419 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 FAM217BQ9NTX9 383 aaPredicted RBP18.5■□□□□ 0.55
CCDC57-213ENST00000581625 LIMCH1Q9UPQ0 1083 aa18.5■□□□□ 0.55
CCDC57-213ENST00000581625 PNMA6FA0A0J9YX94 578 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 CPLX1O14810 134 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 STRNO43815 780 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 PFKFB2O60825 505 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 PRMT2P55345 433 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 SNAP25P60880 206 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 WDR78Q5VTH9 848 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 NOL8Q76FK4 1167 aaKnown RBP18.49■□□□□ 0.55
CCDC57-213ENST00000581625 PLEKHH3Q7Z736 793 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 FBXO11Q86XK2 927 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 ABRAQ8N0Z2 381 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 ZSCAN31Q96LW9 406 aaPredicted RBP18.49■□□□□ 0.55
CCDC57-213ENST00000581625 AGBL1Q96MI9 1066 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 PIGSQ96S52 555 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 LARP6Q9BRS8 491 aaKnown RBP18.49■□□□□ 0.55
CCDC57-213ENST00000581625 AMNQ9BXJ7 453 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 ARHGAP39Q9C0H5 1083 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 ACAD9Q9H845 621 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 SH2B1Q9NRF2 756 aaPredicted RBP18.49■□□□□ 0.55
CCDC57-213ENST00000581625 MGAMO43451 1857 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 ABCB11O95342 1321 aa18.49■□□□□ 0.55
CCDC57-213ENST00000581625 CDKL5O76039 1030 aa18.48■□□□□ 0.55
CCDC57-213ENST00000581625 ALAS1P13196 640 aa18.48■□□□□ 0.55
CCDC57-213ENST00000581625 IFNAR1P17181 557 aa18.48■□□□□ 0.55
CCDC57-213ENST00000581625 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
CCDC57-213ENST00000581625 CCT2P78371 535 aaKnown RBP18.48■□□□□ 0.55
CCDC57-213ENST00000581625 FUT2Q10981 343 aa18.48■□□□□ 0.55
CCDC57-213ENST00000581625 STK3Q13188 491 aa18.48■□□□□ 0.55
CCDC57-213ENST00000581625 CMTR1Q8N1G2 835 aaKnown RBP18.48■□□□□ 0.55
CCDC57-213ENST00000581625 MAF1Q9H063 256 aa18.48■□□□□ 0.55
CCDC57-213ENST00000581625 RNF146Q9NTX7 359 aa18.48■□□□□ 0.55
CCDC57-213ENST00000581625 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
CCDC57-213ENST00000581625 ZSWIM8A7E2V4 1837 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 hCG_1984214I3L0E3 225 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 FCER1AP12319 257 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 CTGFP29279 349 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 SCRN1Q12765 414 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 GRB14Q14449 540 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 KCTD2Q14681 263 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 ME3Q16798 604 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 USH1GQ495M9 461 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 CTU1Q7Z7A3 348 aaKnown RBP18.47■□□□□ 0.55
CCDC57-213ENST00000581625 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 ZNF713Q8N859 430 aaPredicted RBP18.47■□□□□ 0.55
CCDC57-213ENST00000581625 GTF3C6Q969F1 213 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 RNF26Q9BY78 433 aaPredicted RBP18.47■□□□□ 0.55
CCDC57-213ENST00000581625 NCOA5Q9HCD5 579 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms