RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 PLEKHN1Q494U1 663 aaPredicted RBP6.74□□□□□ -1.33
TTC39C-207ENST00000581394 SND1Q7KZF4 910 aaKnown RBP eCLIP6.74□□□□□ -1.33
TTC39C-207ENST00000581394 NLRC3Q7RTR2 1065 aa6.74□□□□□ -1.33
TTC39C-207ENST00000581394 TMEM52Q8NDY8 209 aa6.74□□□□□ -1.33
TTC39C-207ENST00000581394 CDADC1Q9BWV3 514 aa6.74□□□□□ -1.33
TTC39C-207ENST00000581394 KBTBD4Q9NVX7 518 aa6.74□□□□□ -1.33
TTC39C-207ENST00000581394 GFOD1Q9NXC2 390 aa6.74□□□□□ -1.33
TTC39C-207ENST00000581394 IMPACTQ9P2X3 320 aa6.74□□□□□ -1.33
TTC39C-207ENST00000581394 SUPT16HQ9Y5B9 1047 aaKnown RBP6.74□□□□□ -1.33
TTC39C-207ENST00000581394 PCDHB12Q9Y5F1 795 aa6.74□□□□□ -1.33
TTC39C-207ENST00000581394 VAV1P15498 845 aa6.73□□□□□ -1.33
TTC39C-207ENST00000581394 PFKLP17858 780 aa6.73□□□□□ -1.33
TTC39C-207ENST00000581394 KCNC1P48547 511 aa6.73□□□□□ -1.33
TTC39C-207ENST00000581394 SLURP1P55000 103 aa6.73□□□□□ -1.33
TTC39C-207ENST00000581394 PLP2Q04941 152 aa6.73□□□□□ -1.33
TTC39C-207ENST00000581394 ZFYVE27Q5T4F4 411 aa6.73□□□□□ -1.33
TTC39C-207ENST00000581394 ZC3H14Q6PJT7 736 aaKnown RBP6.73□□□□□ -1.33
TTC39C-207ENST00000581394 DNAJC14Q6Y2X3 702 aaPredicted RBP6.73□□□□□ -1.33
TTC39C-207ENST00000581394 JMJD8Q96S16 334 aa6.73□□□□□ -1.33
TTC39C-207ENST00000581394 AP5S1Q9NUS5 200 aa6.73□□□□□ -1.33
TTC39C-207ENST00000581394 CNOT11Q9UKZ1 510 aaKnown RBP6.73□□□□□ -1.33
TTC39C-207ENST00000581394 EIF4A3P38919 411 aaKnown RBP6.72□□□□□ -1.33
TTC39C-207ENST00000581394 RTP5Q14D33 572 aa6.72□□□□□ -1.33
TTC39C-207ENST00000581394 ZXDCQ2QGD7 858 aaPredicted RBP6.72□□□□□ -1.33
TTC39C-207ENST00000581394 AEBP1Q8IUX7 1158 aa6.72□□□□□ -1.33
TTC39C-207ENST00000581394 TMEM192Q8IY95 271 aa6.72□□□□□ -1.33
TTC39C-207ENST00000581394 BDH2Q9BUT1 245 aa6.72□□□□□ -1.33
TTC39C-207ENST00000581394 MKRN2Q9H000 416 aaKnown RBP6.72□□□□□ -1.33
TTC39C-207ENST00000581394 MRS2Q9HD23 443 aa6.72□□□□□ -1.33
TTC39C-207ENST00000581394 VTI1BQ9UEU0 232 aa6.72□□□□□ -1.33
TTC39C-207ENST00000581394 MEIS3P2A8K0S8 358 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 MEIS1O00470 390 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 TNFRSF10CO14798 259 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 PRICKLE3O43900 615 aaPredicted RBP6.71□□□□□ -1.34
TTC39C-207ENST00000581394 NME1P15531 152 aaKnown RBP6.71□□□□□ -1.34
TTC39C-207ENST00000581394 FBLN1P23142 703 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 ITGAEP38570 1179 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 MVKQ03426 396 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 VWA3BQ502W6 1294 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 RTP2Q5QGT7 225 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 CRTC3Q6UUV7 619 aa6.71□□□□□ -1.34
TTC39C-207ENST00000581394 REXO1Q8N1G1 1221 aaKnown RBP6.71□□□□□ -1.34
TTC39C-207ENST00000581394 SRGAP3O43295 1099 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 GSNP06396 782 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 MSL3P1P0C860 447 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 LIMS1P48059 325 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 ZNF200P98182 395 aaPredicted RBP6.7□□□□□ -1.34
TTC39C-207ENST00000581394 CLCQ05315 142 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 AUHQ13825 339 aaKnown RBP6.7□□□□□ -1.34
TTC39C-207ENST00000581394 TARBP2Q15633 366 aaKnown RBP6.7□□□□□ -1.34
TTC39C-207ENST00000581394 SLC6A18Q96N87 628 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 COPRSQ9NQ92 184 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 FBXL21Q9UKT6 434 aa6.7□□□□□ -1.34
TTC39C-207ENST00000581394 CYBBP04839 570 aa6.69□□□□□ -1.34
TTC39C-207ENST00000581394 CRKP46108 304 aa6.69□□□□□ -1.34
TTC39C-207ENST00000581394 LRRFIP1Q32MZ4 808 aaKnown RBP6.69□□□□□ -1.34
TTC39C-207ENST00000581394 HLA-DQA1Q5Y7H0 255 aa6.69□□□□□ -1.34
TTC39C-207ENST00000581394 PAQR3Q6TCH7 311 aa6.69□□□□□ -1.34
TTC39C-207ENST00000581394 ZNF296Q8WUU4 475 aaPredicted RBP6.69□□□□□ -1.34
TTC39C-207ENST00000581394 DBHP09172 617 aa6.68□□□□□ -1.34
TTC39C-207ENST00000581394 SRRTQ9BXP5 876 aaKnown RBP6.68□□□□□ -1.34
TTC39C-207ENST00000581394 MYRFQ9Y2G1 1151 aa6.68□□□□□ -1.34
TTC39C-207ENST00000581394 A0A1W2PQ27 194 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 A0A1W2PQ64 194 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 A0A1W2PQC6 194 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 A0A1W2PQD8 194 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
TTC39C-207ENST00000581394 HTRA3P83110 453 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 HHIPL2Q6UWX4 724 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 LIPIQ6XZB0 460 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 GK5Q6ZS86 529 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 FNIP1Q8TF40 1166 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 SLC12A9Q9BXP2 914 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 RNF38Q9H0F5 515 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 SUSD2Q9UGT4 822 aa6.67□□□□□ -1.34
TTC39C-207ENST00000581394 SH3D21A4FU49 640 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 SHOXO15266 292 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 GSTM1P09488 218 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 ZNF165P49910 485 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 FOXO4P98177 505 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 TAGLNQ01995 201 aaKnown RBP6.66□□□□□ -1.34
TTC39C-207ENST00000581394 SEZ6Q53EL9 994 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 CYP2R1Q6VVX0 501 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 SAPCD2Q86UD0 394 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 C7orf61Q8IZ16 206 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 NAT16Q8N8M0 369 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 DSCC1Q9BVC3 393 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 ANTXR1Q9H6X2 564 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 SUCOQ9UBS9 1254 aaKnown RBP6.66□□□□□ -1.34
TTC39C-207ENST00000581394 PMF1-BGLAPU3KQ54 211 aa6.66□□□□□ -1.34
TTC39C-207ENST00000581394 K7ESM1 405 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 FGF10O15520 208 aaPredicted RBP6.65□□□□□ -1.34
TTC39C-207ENST00000581394 INSRRP14616 1297 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 ATF2P15336 505 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 CORO7P57737 925 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 UBXN11Q5T124 520 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 NT5DC1Q5TFE4 455 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 INTS3Q68E01 1043 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms