RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 MRFAP1Q9Y605 127 aa11.82□□□□□ -0.52
TOP3A-209ENST00000580095 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 PNMA6AP0CW24 399 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-209ENST00000580095 KRT9P35527 623 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 TXLNAP40222 546 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 CDK8P49336 464 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 ZNF658Q5TYW1 1059 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-209ENST00000580095 WDR66Q8TBY9 1149 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 NOL10Q9BSC4 688 aaKnown RBP11.81□□□□□ -0.52
TOP3A-209ENST00000580095 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.81□□□□□ -0.52
TOP3A-209ENST00000580095 POLR3GO15318 223 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-209ENST00000580095 BAG3O95817 575 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 TECP42680 631 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 TRAPPC10P48553 1259 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 KLK7P49862 253 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 TXNRD1Q16881 649 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 RPGRQ92834 1020 aaKnown RBP11.81□□□□□ -0.52
TOP3A-209ENST00000580095 GJA10Q969M2 543 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 CEP95Q96GE4 821 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 PIGSQ96S52 555 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 SRRTQ9BXP5 876 aaKnown RBP11.81□□□□□ -0.52
TOP3A-209ENST00000580095 RTFDC1Q9BY42 306 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-209ENST00000580095 RWDD2AQ9UIY3 292 aa11.81□□□□□ -0.52
TOP3A-209ENST00000580095 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 PARP1P09874 1014 aaKnown RBP11.8□□□□□ -0.52
TOP3A-209ENST00000580095 PLCG1P19174 1290 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 LONP1P36776 959 aaKnown RBP11.8□□□□□ -0.52
TOP3A-209ENST00000580095 CCDC178Q5BJE1 867 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 MFSD14BQ5SR56 506 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 AMOTL1Q8IY63 956 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 LRRC47Q8N1G4 583 aaKnown RBP11.8□□□□□ -0.52
TOP3A-209ENST00000580095 CTAGE1Q96RT6 745 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 CD209Q9NNX6 404 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
TOP3A-209ENST00000580095 BARHL2Q9NY43 387 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 SCN7AQ01118 1682 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 UTRNP46939 3433 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 SMCO2A6NFE2 343 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 M0R2N6 131 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 FCER1AP12319 257 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 TMCO3Q6UWJ1 677 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 ZNF804AQ7Z570 1209 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 SLC35F6Q8N357 371 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 ABHD10Q9NUJ1 306 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 A0A1B0GUL6 1792 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 ERICH4A6NGS2 130 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 EFCAB8A8MWE9 144 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 SASH3O75995 380 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 KIF4BQ2VIQ3 1234 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
TOP3A-209ENST00000580095 COA7Q96BR5 231 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 PARD6BQ9BYG5 372 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 USP21Q9UK80 565 aa11.8□□□□□ -0.52
TOP3A-209ENST00000580095 TTC26A0AVF1 554 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 PALM3A6NDB9 673 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-209ENST00000580095 B4DLN1 442 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 RAD21O60216 631 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 KIF5CO60282 957 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 PLA2G4AP47712 749 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 VPS72Q15906 364 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
TOP3A-209ENST00000580095 LIMA1Q9UHB6 759 aaKnown RBP11.79□□□□□ -0.52
TOP3A-209ENST00000580095 TXKP42681 527 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 STK4Q13043 487 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 CNGA4Q8IV77 575 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 ADSSL1Q8N142 457 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 POLLQ9UGP5 575 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 GUCA1BQ9UMX6 200 aa11.79□□□□□ -0.52
TOP3A-209ENST00000580095 GOLGA6L9A6NEM1 432 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 ENC1O14682 589 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 KLRC4O43908 158 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 TUBB4AP04350 444 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 FLT1P17948 1338 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 ATP2B2Q01814 1243 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 TBCKQ8TEA7 893 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 RREB1Q92766 1687 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 GPCPD1Q9NPB8 672 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 PDS5AQ29RF7 1337 aaKnown RBP11.78□□□□□ -0.52
TOP3A-209ENST00000580095 TPM1P09493 284 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 RHOXF2BP0C7M4 288 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 GYS2P54840 703 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 GTF2IP78347 998 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 ASIC1P78348 528 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 BMS1Q14692 1282 aaKnown RBP11.78□□□□□ -0.52
TOP3A-209ENST00000580095 CABP7Q86V35 215 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 RHOXF2Q9BQY4 288 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 LEMD3Q9Y2U8 911 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 LAMB2P55268 1798 aa11.78□□□□□ -0.52
TOP3A-209ENST00000580095 TERF2Q15554 542 aa11.77□□□□□ -0.52
TOP3A-209ENST00000580095 ANKRD20A12PQ8NF67 263 aa11.77□□□□□ -0.52
TOP3A-209ENST00000580095 SUGCTQ9HAC7 445 aa11.77□□□□□ -0.52
TOP3A-209ENST00000580095 AGPAT5Q9NUQ2 364 aa11.77□□□□□ -0.52
TOP3A-209ENST00000580095 HDAC6Q9UBN7 1215 aa11.77□□□□□ -0.52
TOP3A-209ENST00000580095 LRRC10BA6NIK2 292 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 ZRANB2O95218 330 aaKnown RBP eCLIP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms