RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ZNF214Q9UL59 606 aaPredicted RBP18.08■□□□□ 0.48
SLC6A4-205ENST00000579221 ST18O60284 1047 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 HOXD10P28358 340 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 TKFCQ3LXA3 575 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 SNRNP48Q6IEG0 339 aaKnown RBP18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 TMTC3Q6ZXV5 915 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 NCAPG2Q86XI2 1143 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 SRBD1Q8N5C6 995 aaKnown RBP18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 SPZ1Q9BXG8 430 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 SLKQ9H2G2 1235 aaPredicted RBP18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 MROH8Q9H579 483 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 PRDM10Q9NQV6 1147 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
SLC6A4-205ENST00000579221 ECM2O94769 699 aaPredicted RBP18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 PLEKHA8P1O95397 391 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 GNRH1P01148 92 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 ICAM1P05362 532 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 ERCC3P19447 782 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 CDC27P30260 824 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 CCT2P78371 535 aaKnown RBP18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 CDC37Q16543 378 aaPredicted RBP18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 WDR78Q5VTH9 848 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 NBPF11Q86T75 865 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 COA7Q96BR5 231 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 MTMR8Q96EF0 704 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 RRP36Q96EU6 259 aaKnown RBP18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 AGBL1Q96MI9 1066 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 PORCNQ9H237 461 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 EFCC1Q9HA90 598 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 FAM217BQ9NTX9 383 aaPredicted RBP18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 CCPG1Q9ULG6 757 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 LIMCH1Q9UPQ0 1083 aa18.06■□□□□ 0.48
SLC6A4-205ENST00000579221 ZNF536O15090 1300 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 TNPO2O14787 897 aaKnown RBP18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 ZBTB5O15062 677 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 CYTH3O43739 400 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 TRAF1Q13077 416 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 STK3Q13188 491 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 NOL8Q76FK4 1167 aaKnown RBP18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 PLEKHH3Q7Z736 793 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 FBXO11Q86XK2 927 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 CMTR1Q8N1G2 835 aaKnown RBP18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 CCDC82Q8N4S0 544 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 CHST13Q8NET6 341 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 ARHGAP39Q9C0H5 1083 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 FBXO40Q9UH90 709 aa18.05■□□□□ 0.48
SLC6A4-205ENST00000579221 NID2Q14112 1375 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 RLFQ13129 1914 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 CEP350Q5VT06 3117 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 PNMA6FA0A0J9YX94 578 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 STRNO43815 780 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 PFKFB2O60825 505 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 ALAS1P13196 640 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 SLC35G1Q2M3R5 365 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 QRICH1Q2TAL8 776 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 CPLX2Q6PUV4 134 aaKnown RBP18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 GPR142Q7Z601 462 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 HOMER1Q86YM7 354 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 TRIM47Q96LD4 638 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 ZSCAN31Q96LW9 406 aaPredicted RBP18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 PIGSQ96S52 555 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 SEC63Q9UGP8 760 aaKnown RBP18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 RIPK3Q9Y572 518 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 IVNS1ABPQ9Y6Y0 642 aa18.04■□□□□ 0.48
SLC6A4-205ENST00000579221 CPLX1O14810 134 aa18.03■□□□□ 0.48
SLC6A4-205ENST00000579221 CTGFP29279 349 aa18.03■□□□□ 0.48
SLC6A4-205ENST00000579221 PIBF1Q8WXW3 757 aa18.03■□□□□ 0.48
SLC6A4-205ENST00000579221 TRERF1Q96PN7 1200 aa18.03■□□□□ 0.48
SLC6A4-205ENST00000579221 AMNQ9BXJ7 453 aa18.03■□□□□ 0.48
SLC6A4-205ENST00000579221 SLC15A5A6NIM6 579 aa18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 FCER1AP12319 257 aa18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 PTPREP23469 700 aa18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 MCM2P49736 904 aa18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 PRMT2P55345 433 aa18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 ME3Q16798 604 aa18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 NCOA5Q9HCD5 579 aaKnown RBP18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 TRIM17Q9Y577 477 aa18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 V9GY48 417 aaPredicted RBP18.02■□□□□ 0.48
SLC6A4-205ENST00000579221 ABCB11O95342 1321 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 IFNAR1P17181 557 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 AKAP17AQ02040 695 aaKnown RBP18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 FUT2Q10981 343 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 SCRN1Q12765 414 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 KCTD2Q14681 263 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 USH1GQ495M9 461 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 OTOP1Q7RTM1 612 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 CTU1Q7Z7A3 348 aaKnown RBP18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 ABRAQ8N0Z2 381 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 MMP19Q99542 508 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 NUDT12Q9BQG2 462 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 RNF146Q9NTX7 359 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 SRRDQ9UH36 339 aa18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 MRPL11Q9Y3B7 192 aaKnown RBP18.01■□□□□ 0.47
SLC6A4-205ENST00000579221 PARP14Q460N5 1801 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 PRPF3O43395 683 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms