RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PGAP2Q9UHJ9 254 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 IQSEC3Q9UPP2 1182 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 AKAP2Q9Y2D5 859 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 GPC6Q9Y625 555 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 RLFQ13129 1914 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 GAKO14976 1311 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 ASTN2O75129 1339 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 COL2A1P02458 1487 aaPredicted RBP4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 TCRBV5S4A2TA0A5A2 114 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 APBB1O00213 710 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 CHGBP05060 677 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 JUNBP17275 347 aaPredicted RBP4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 ATP5JP18859 108 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 RPS12P25398 132 aaKnown RBP4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 PRDX5P30044 214 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 EPS15P42566 896 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 ZAP70P43403 619 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 KCNJ4P48050 445 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 SH3D19Q5HYK7 790 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 ERICH6BQ5W0A0 696 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 TSHZ3Q63HK5 1081 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 TTLL5Q6EMB2 1281 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 ADGRA1Q86SQ6 560 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 CHD1LQ86WJ1 897 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 PLEKHM2Q8IWE5 1019 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 ABI1Q8IZP0 508 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 SPATA5Q8NB90 893 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 MTMR14Q8NCE2 650 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 AGBL3Q8NEM8 1001 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 JDP2Q8WYK2 163 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 BHMTQ93088 406 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 EDC3Q96F86 508 aaKnown RBP4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 MRPL18Q9H0U6 180 aaKnown RBP4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 TAF1DQ9H5J8 278 aaPredicted RBP4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 IGFLR1Q9H665 355 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 JAG2Q9Y219 1238 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 NDUFB9Q9Y6M9 179 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 MYO3BQ8WXR4 1341 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 CNTNAP1P78357 1384 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 ATRNL1Q5VV63 1379 aa4.64□□□□□ -1.67
SMARCE1-215ENST00000578995 COL11A1P12107 1806 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 FOXP2O15409 715 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 UQCRFS1P1P0C7P4 283 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 GSPT1P15170 499 aaKnown RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 YY1P25490 414 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 PDE1AP54750 535 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 EIF6P56537 245 aaKnown RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 HDLBPQ00341 1268 aaKnown RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 NFIAQ12857 509 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 OS9Q13438 667 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 TNIP1Q15025 636 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 SLFNL1Q499Z3 407 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 CAVIN4Q5BKX8 364 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 MFSD14BQ5SR56 506 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 WFDC8Q8IUA0 241 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 CLASRPQ8N2M8 674 aaKnown RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 NSUN4Q96CB9 384 aaKnown RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 NEUROD6Q96NK8 337 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 HAUS7Q99871 368 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 LNPKQ9C0E8 428 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 TMX4Q9H1E5 349 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 RWDD1Q9H446 243 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 EFCC1Q9HA90 598 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 BRD7Q9NPI1 651 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 SNRKQ9NRH2 765 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 ECHDC1Q9NTX5 307 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 DENND2AQ9ULE3 1009 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 KCNH4Q9UQ05 1017 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 SUGT1Q9Y2Z0 365 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 TTC41PQ6P2S7 1318 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 A0A0G2JMZ2 1700 aa4.63□□□□□ -1.67
SMARCE1-215ENST00000578995 MGAMO43451 1857 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 A6NJY4 79 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 WNT10BO00744 389 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 ALX3O95076 343 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 MX1P20591 662 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 EPHX2P34913 555 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 TXLNAP40222 546 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 CRKP46108 304 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 RHBDL3P58872 404 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 MECOMQ03112 1051 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 CHAF1AQ13111 956 aaPredicted RBP4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 MTFR1Q15390 333 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 NBPF9Q3BBW0 867 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 ANKRD45Q5TZF3 282 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 B4GALNT3Q6L9W6 998 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 APOBEC3HQ6NTF7 200 aaKnown RBP4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 HHIPL2Q6UWX4 724 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 CENPQQ7L2Z9 268 aaPredicted RBP4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 KIAA0825Q8IV33 1275 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 WDR66Q8TBY9 1149 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 TBC1D22AQ8WUA7 517 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 PRMT6Q96LA8 375 aaPredicted RBP4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 ZDHHC15Q96MV8 337 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 RIOK1Q9BRS2 568 aaKnown RBP4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 MRIQ9BWK5 157 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 IL25Q9H293 177 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 MYOZ2Q9NPC6 264 aa4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 ADARB2Q9NS39 739 aaKnown RBP4.62□□□□□ -1.67
SMARCE1-215ENST00000578995 PPP4R2Q9NY27 417 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms