RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SNW1Q13573 536 aaKnown RBP23.11■■□□□ 1.29
SMG8-203ENST00000578922 ZNF830Q96NB3 372 aaPredicted RBP23.11■■□□□ 1.29
SMG8-203ENST00000578922 PCDHA6Q9UN73 950 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 PCDHA8Q9Y5H6 950 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 DICER1Q9UPY3 1922 aaKnown RBP23.11■■□□□ 1.29
SMG8-203ENST00000578922 FAM160A1Q05DH4 1040 aa23.1■■□□□ 1.29
SMG8-203ENST00000578922 NBPF12Q5TAG4 269 aaPredicted RBP23.1■■□□□ 1.29
SMG8-203ENST00000578922 GMCL1P1Q8NEA9 526 aa23.1■■□□□ 1.29
SMG8-203ENST00000578922 ARHGEF10LQ9HCE6 1279 aa23.1■■□□□ 1.29
SMG8-203ENST00000578922 PPP1R11O60927 126 aaPredicted RBP23.1■■□□□ 1.29
SMG8-203ENST00000578922 SNAP25P60880 206 aa23.1■■□□□ 1.29
SMG8-203ENST00000578922 GRIN1Q05586 938 aa23.1■■□□□ 1.29
SMG8-203ENST00000578922 SPECC1Q5M775 1068 aa23.1■■□□□ 1.29
SMG8-203ENST00000578922 TTC38Q5R3I4 469 aa23.1■■□□□ 1.29
SMG8-203ENST00000578922 ENGASEQ8NFI3 743 aa23.1■■□□□ 1.29
SMG8-203ENST00000578922 CCDC12Q8WUD4 166 aaPredicted RBP23.1■■□□□ 1.29
SMG8-203ENST00000578922 PNMA6FA0A0J9YX94 578 aa23.09■■□□□ 1.29
SMG8-203ENST00000578922 PLCB2Q00722 1185 aa23.09■■□□□ 1.29
SMG8-203ENST00000578922 KIAA1755Q5JYT7 1200 aa23.09■■□□□ 1.29
SMG8-203ENST00000578922 GLIS2Q9BZE0 524 aaPredicted RBP23.09■■□□□ 1.29
SMG8-203ENST00000578922 ZMYND12Q9H0C1 365 aa23.09■■□□□ 1.29
SMG8-203ENST00000578922 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.09■■□□□ 1.29
SMG8-203ENST00000578922 CCDC194A0A1B0GVG4 234 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 PHF20L1A8MW92 1017 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 M0R2N6 131 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 AP5Z1O43299 807 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 HIRAP54198 1017 aaPredicted RBP23.08■■□□□ 1.29
SMG8-203ENST00000578922 SHC4Q6S5L8 630 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 KRI1Q8N9T8 703 aaKnown RBP23.08■■□□□ 1.29
SMG8-203ENST00000578922 C6orf50Q9HD87 102 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 GGA3Q9NZ52 723 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 TMEM232C9JQI7 657 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 KINO60870 393 aaKnown RBP23.08■■□□□ 1.29
SMG8-203ENST00000578922 BMP3P12645 472 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 PFKFB1P16118 471 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 MAP3K10Q02779 954 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 C9orf131Q5VYM1 1079 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 GMCL1Q96IK5 515 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 FZD1Q9UP38 647 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 CEP131Q9UPN4 1083 aa23.08■■□□□ 1.29
SMG8-203ENST00000578922 ZBTB5O15062 677 aa23.07■■□□□ 1.28
SMG8-203ENST00000578922 CMA1P23946 247 aa23.07■■□□□ 1.28
SMG8-203ENST00000578922 FMR1NBQ8N0W7 255 aaPredicted RBP23.07■■□□□ 1.28
SMG8-203ENST00000578922 DAGLBQ8NCG7 672 aa23.07■■□□□ 1.28
SMG8-203ENST00000578922 KIAA1524Q8TCG1 905 aa23.07■■□□□ 1.28
SMG8-203ENST00000578922 FAM13BQ9NYF5 915 aa23.07■■□□□ 1.28
SMG8-203ENST00000578922 MCM7P33993 719 aa23.07■■□□□ 1.28
SMG8-203ENST00000578922 GALNT17Q6IS24 598 aa23.07■■□□□ 1.28
SMG8-203ENST00000578922 BIN2Q9UBW5 565 aaPredicted RBP23.07■■□□□ 1.28
SMG8-203ENST00000578922 FBXO2Q9UK22 296 aaPredicted RBP23.07■■□□□ 1.28
SMG8-203ENST00000578922 TMX2Q9Y320 296 aa23.07■■□□□ 1.28
SMG8-203ENST00000578922 CUTAO60888 179 aa23.06■■□□□ 1.28
SMG8-203ENST00000578922 GNA11P29992 359 aa23.06■■□□□ 1.28
SMG8-203ENST00000578922 GTF2F1P35269 517 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMG8-203ENST00000578922 INF2Q27J81 1249 aa23.06■■□□□ 1.28
SMG8-203ENST00000578922 QRICH1Q2TAL8 776 aa23.06■■□□□ 1.28
SMG8-203ENST00000578922 ASNSP08243 561 aa23.06■■□□□ 1.28
SMG8-203ENST00000578922 RBM10P98175 930 aaKnown RBP23.06■■□□□ 1.28
SMG8-203ENST00000578922 CDC37Q16543 378 aaPredicted RBP23.06■■□□□ 1.28
SMG8-203ENST00000578922 JAKMIP3Q5VZ66 844 aa23.06■■□□□ 1.28
SMG8-203ENST00000578922 TMEM260Q9NX78 707 aa23.06■■□□□ 1.28
SMG8-203ENST00000578922 FAM83BQ5T0W9 1011 aa23.05■■□□□ 1.28
SMG8-203ENST00000578922 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.05■■□□□ 1.28
SMG8-203ENST00000578922 GOPCQ9HD26 462 aa23.05■■□□□ 1.28
SMG8-203ENST00000578922 PTPREP23469 700 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 SAMD1Q6SPF0 538 aaPredicted RBP23.04■■□□□ 1.28
SMG8-203ENST00000578922 APOBEC3FQ8IUX4 373 aaKnown RBP23.04■■□□□ 1.28
SMG8-203ENST00000578922 ERCC4Q92889 916 aaPredicted RBP23.04■■□□□ 1.28
SMG8-203ENST00000578922 MTMR8Q96EF0 704 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 CBX8Q9HC52 389 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 hCG_1984214I3L0E3 225 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 INPP5BP32019 993 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 ADCY7P51828 1080 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 PTGDRQ13258 359 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 ANO6Q4KMQ2 910 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 RESP18Q5W5W9 173 aa23.04■■□□□ 1.28
SMG8-203ENST00000578922 ZNF713Q8N859 430 aaPredicted RBP23.04■■□□□ 1.28
SMG8-203ENST00000578922 CTAGE5O15320 804 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 ZNF202O95125 648 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 LMOD1P29536 600 aaPredicted RBP23.03■■□□□ 1.28
SMG8-203ENST00000578922 TRAPPC10P48553 1259 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 SYDE2Q5VT97 1194 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 REXO1Q8N1G1 1221 aaKnown RBP23.03■■□□□ 1.28
SMG8-203ENST00000578922 ZNF341Q9BYN7 854 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 SRPRBQ9Y5M8 271 aaKnown RBP23.03■■□□□ 1.28
SMG8-203ENST00000578922 TAL1P17542 331 aaPredicted RBP23.03■■□□□ 1.28
SMG8-203ENST00000578922 FEZ1Q99689 392 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 SDF4Q9BRK5 362 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 CSRNP2Q9H175 543 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 KCNF1Q9H3M0 494 aa23.03■■□□□ 1.28
SMG8-203ENST00000578922 SYKP43405 635 aa23.02■■□□□ 1.28
SMG8-203ENST00000578922 UBE2SQ16763 222 aa23.02■■□□□ 1.28
SMG8-203ENST00000578922 DLK2Q6UY11 383 aa23.02■■□□□ 1.28
SMG8-203ENST00000578922 LUZP1Q86V48 1076 aa23.02■■□□□ 1.28
SMG8-203ENST00000578922 FAM177A1Q8N128 213 aaPredicted RBP23.02■■□□□ 1.28
SMG8-203ENST00000578922 VCPKMTQ9H867 229 aa23.02■■□□□ 1.28
SMG8-203ENST00000578922 PCDHA1Q9Y5I3 950 aa23.02■■□□□ 1.28
SMG8-203ENST00000578922 ESYT2A0FGR8 921 aa23.01■■□□□ 1.27
SMG8-203ENST00000578922 GPR162Q16538 588 aa23.01■■□□□ 1.27
SMG8-203ENST00000578922 NONOQ15233 471 aaKnown RBP eCLIP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms