RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 KCNQ1P51787 676 aa10.96□□□□□ -0.65
PTPRM-210ENST00000578916 CCL23P55773 120 aa10.96□□□□□ -0.65
PTPRM-210ENST00000578916 C16orf86Q6ZW13 317 aa10.96□□□□□ -0.65
PTPRM-210ENST00000578916 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
PTPRM-210ENST00000578916 ARMCX2Q7L311 632 aa10.96□□□□□ -0.65
PTPRM-210ENST00000578916 RPUSD2Q8IZ73 545 aaKnown RBP10.96□□□□□ -0.65
PTPRM-210ENST00000578916 CPXCR1Q8N123 301 aa10.96□□□□□ -0.65
PTPRM-210ENST00000578916 PRPF38AQ8NAV1 312 aaKnown RBP10.96□□□□□ -0.65
PTPRM-210ENST00000578916 NUP88Q99567 741 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-210ENST00000578916 LRFN3Q9BTN0 628 aa10.96□□□□□ -0.65
PTPRM-210ENST00000578916 EXOC6BQ9Y2D4 811 aa10.96□□□□□ -0.65
PTPRM-210ENST00000578916 PCDHA11Q9Y5I1 949 aa10.96□□□□□ -0.65
PTPRM-210ENST00000578916 UMODL1Q5DID0 1318 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 ZBBXA8MT70 800 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 SMIM22K7EJ46 135 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 ERC2O15083 957 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 CABYRO75952 493 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 MYOGP15173 224 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 BEX3Q00994 111 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 TNFAIP2Q03169 654 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 ITGA7Q13683 1181 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 TMEM31Q5JXX7 168 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 CXCL17Q6UXB2 119 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 FTSJ3Q8IY81 847 aaKnown RBP10.95□□□□□ -0.66
PTPRM-210ENST00000578916 SLC43A3Q8NBI5 491 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPRM-210ENST00000578916 EPHX3Q9H6B9 360 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 RAVER2Q9HCJ3 691 aaKnown RBP10.95□□□□□ -0.66
PTPRM-210ENST00000578916 IL1RAPL2Q9NP60 686 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 FBXO40Q9UH90 709 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 ZNFX1Q9P2E3 1918 aaKnown RBP10.95□□□□□ -0.66
PTPRM-210ENST00000578916 XIRP2A4UGR9 3374 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 BDP1A6H8Y1 2624 aa10.95□□□□□ -0.66
PTPRM-210ENST00000578916 F5H6K3 240 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 ATP2A1O14983 1001 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 CTAGE5O15320 804 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 ZEB2O60315 1214 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 ATP2A2P16615 1042 aaKnown RBP10.94□□□□□ -0.66
PTPRM-210ENST00000578916 NKX3-2P78367 333 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 KLRC3Q07444 240 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 CEP85Q6P2H3 762 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 CCDC144CPQ8IYA2 1237 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 PIAS4Q8N2W9 510 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-210ENST00000578916 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 FGD4Q96M96 766 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 SEZ6LQ9BYH1 1024 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 AP5M1Q9H0R1 490 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 TRPV6Q9H1D0 765 aa10.94□□□□□ -0.66
PTPRM-210ENST00000578916 CHD7Q9P2D1 2997 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.93□□□□□ -0.66
PTPRM-210ENST00000578916 RFXAPO00287 272 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 NDUFB10O96000 172 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 IFIT2P09913 472 aaKnown RBP10.93□□□□□ -0.66
PTPRM-210ENST00000578916 ADD2P35612 726 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 FSCN1Q16658 493 aaKnown RBP10.93□□□□□ -0.66
PTPRM-210ENST00000578916 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 TMEM67Q5HYA8 995 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTPRM-210ENST00000578916 TLK2Q86UE8 772 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 CLASRPQ8N2M8 674 aaKnown RBP10.93□□□□□ -0.66
PTPRM-210ENST00000578916 RHPN1Q8TCX5 695 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 NOC4LQ9BVI4 516 aaKnown RBP10.93□□□□□ -0.66
PTPRM-210ENST00000578916 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTPRM-210ENST00000578916 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTPRM-210ENST00000578916 BCL11AQ9H165 835 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 WNT8AQ9H1J5 351 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 CERS4Q9HA82 394 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 PAG1Q9NWQ8 432 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 NYAP2Q9P242 653 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 COG5Q9UP83 839 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 MTCH2Q9Y6C9 303 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 SLC4A4Q9Y6R1 1079 aa10.93□□□□□ -0.66
PTPRM-210ENST00000578916 DYNC1LI2O43237 492 aaPredicted RBP10.92□□□□□ -0.66
PTPRM-210ENST00000578916 B4GALT4O60513 344 aa10.92□□□□□ -0.66
PTPRM-210ENST00000578916 POU3F3P20264 500 aaPredicted RBP10.92□□□□□ -0.66
PTPRM-210ENST00000578916 CTR9Q6PD62 1173 aa10.92□□□□□ -0.66
PTPRM-210ENST00000578916 SCLYQ96I15 445 aa10.92□□□□□ -0.66
PTPRM-210ENST00000578916 KATNBL1Q9H079 304 aa10.92□□□□□ -0.66
PTPRM-210ENST00000578916 MKNK2Q9HBH9 465 aa10.92□□□□□ -0.66
PTPRM-210ENST00000578916 SLC38A10Q9HBR0 1119 aa10.92□□□□□ -0.66
PTPRM-210ENST00000578916 HOMER2Q9NSB8 354 aa10.92□□□□□ -0.66
PTPRM-210ENST00000578916 FEM1BQ9UK73 627 aa10.92□□□□□ -0.66
PTPRM-210ENST00000578916 COL11A1P12107 1806 aaPredicted RBP10.92□□□□□ -0.66
PTPRM-210ENST00000578916 PARP14Q460N5 1801 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 ASTN1O14525 1302 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 GRIN2DO15399 1336 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 ASB14A6NK59 587 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 TLL1O43897 1013 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 CA3P07451 260 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 PFKMP08237 780 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 ACTN1P12814 892 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 OAZ1P54368 228 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 CNTN2Q02246 1040 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 TTLL4Q14679 1199 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 STK11IPQ8N1F8 1099 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-210ENST00000578916 HLA-CQ95604 372 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms