RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 CDADC1Q9BWV3 514 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 ADAMTS10Q9H324 1103 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 ZSWIM4Q9H7M6 989 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 PRDM7Q9NQW5 492 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 MBNL3Q9NUK0 354 aaKnown RBP3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 ZMYM5Q9UJ78 669 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 TMEM59LQ9UK28 342 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 ADAMTS6Q9UKP5 1117 aa3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 OAS3Q9Y6K5 1087 aaKnown RBP3.38□□□□□ -1.87
PTP4A1-204ENST00000578299 DNAJC25-GNG10A0A024R161 153 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 A0A1W2PQU0 124 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 FAM221BA6H8Z2 402 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 AURKAO14965 403 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 VAMP4O75379 141 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 ZGLP1P0C6A0 271 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 HOXC12P31275 282 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 GDNFP39905 211 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 CHRNEQ04844 493 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 SSRP1Q08945 709 aaKnown RBP3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 HSP90AA2PQ14568 343 aaPredicted RBP3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 DPY19L1Q2PZI1 675 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 RALGPS1Q5JS13 557 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 RTP2Q5QGT7 225 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 EEF1DP3Q658K8 133 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 RCSD1Q6JBY9 416 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 CYP2R1Q6VVX0 501 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 OXR1Q8N573 874 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 NAT16Q8N8M0 369 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 BTN2A2Q8WVV5 523 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 LINC01599Q8WXQ3 324 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 FCRL2Q96LA5 508 aaPredicted RBP3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 CCDC140Q96MF4 163 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 FCRL3Q96P31 734 aaPredicted RBP3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 SPATA9Q9BWV2 254 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 NKX2-4Q9H2Z4 354 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 RC3H2Q9HBD1 1191 aaKnown RBP3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 CWC22Q9HCG8 908 aaKnown RBP3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 CYP26B1Q9NR63 512 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 CDK11AQ9UQ88 783 aaPredicted RBP3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 GPR55Q9Y2T6 319 aaPredicted RBP3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 BACE2Q9Y5Z0 518 aa3.37□□□□□ -1.87
PTP4A1-204ENST00000578299 TRBV23OR9-2A0A075B6M9 112 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 FITM1A5D6W6 292 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 C2orf71A6NGG8 1288 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 STXBP3O00186 592 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 FGF10O15520 208 aaPredicted RBP3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 TBX1O43435 398 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 IGSF3O75054 1194 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 HPXP02790 462 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 CAPNS1P04632 268 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 SCG5P05408 212 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 RAC2P15153 192 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 IFNGR1P15260 489 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 KIR2DL1P43626 348 aaPredicted RBP3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 KIR2DL2P43627 348 aaPredicted RBP3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 SEPHS1P49903 392 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 HK2P52789 917 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 PPP2R2AP63151 447 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 RBM10P98175 930 aaKnown RBP3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 LONRF2Q1L5Z9 754 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 CBLL1Q75N03 491 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 SPATC1Q76KD6 591 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 SPPL2CQ8IUH8 684 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 KSR1Q8IVT5 923 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 ANKS4BQ8N8V4 417 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 PDZD8Q8NEN9 1154 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 FLAD1Q8NFF5 587 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 MAP6Q96JE9 813 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 HHIPL1Q96JK4 782 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 PTCHD1Q96NR3 888 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 DNAJC7Q99615 494 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 MCMBPQ9BTE3 642 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 AARSD1Q9BTE6 412 aaKnown RBP3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 G6PC3Q9BUM1 346 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 LGR4Q9BXB1 951 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 AP5S1Q9NUS5 200 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 ERVK13-1Q9NX77 482 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 TNFRSF10DQ9UBN6 386 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 PFDN2Q9UHV9 154 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 ADGRE2Q9UHX3 823 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 CTNND2Q9UQB3 1225 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 KDM2BQ8NHM5 1336 aa3.36□□□□□ -1.87
PTP4A1-204ENST00000578299 TRAV20A0A0B4J274 112 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 BIN1O00499 593 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 DIAPH1O60610 1272 aaKnown RBP3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 TBC1D8O95759 1140 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 CPP00450 1065 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 SNRPB2P08579 225 aaKnown RBP3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 FGFR1P11362 822 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 AFMP43652 599 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 KCNJ6P48051 423 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 SCRN1Q12765 414 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 MAP4K2Q12851 820 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 NR0B2Q15466 257 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 ZC3H12BQ5HYM0 836 aaKnown RBP3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 HLA-DQA1Q5Y7H0 255 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 ZPBP2Q6X784 338 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 ATG4DQ86TL0 474 aaPredicted RBP3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 NOP9Q86U38 636 aaKnown RBP3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 LILRA2Q8N149 483 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms