RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 NLRP5P59047 1200 aa15.07■□□□□ 0
CTC1-203ENST00000578240 BLIDQ8IZY5 108 aa15.07■□□□□ 0
CTC1-203ENST00000578240 LINC00301Q8NCQ3 95 aa15.07■□□□□ 0
CTC1-203ENST00000578240 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
CTC1-203ENST00000578240 WDR46O15213 610 aaKnown RBP15.06■□□□□ 0
CTC1-203ENST00000578240 PLA2G6O60733 806 aa15.06■□□□□ 0
CTC1-203ENST00000578240 CALML3P27482 149 aa15.06■□□□□ 0
CTC1-203ENST00000578240 SPP2Q13103 211 aa15.06■□□□□ 0
CTC1-203ENST00000578240 GNL2Q13823 731 aaKnown RBP15.06■□□□□ 0
CTC1-203ENST00000578240 ANO1Q5XXA6 986 aa15.06■□□□□ 0
CTC1-203ENST00000578240 PPP1R18Q6NYC8 613 aa15.06■□□□□ 0
CTC1-203ENST00000578240 CLMNQ96JQ2 1002 aa15.06■□□□□ 0
CTC1-203ENST00000578240 ZNF396Q96N95 335 aaPredicted RBP15.06■□□□□ 0
CTC1-203ENST00000578240 PCDHA6Q9UN73 950 aa15.06■□□□□ 0
CTC1-203ENST00000578240 PCDHA8Q9Y5H6 950 aa15.06■□□□□ 0
CTC1-203ENST00000578240 TRAF5O00463 557 aa15.06■□□□□ 0
CTC1-203ENST00000578240 OPLAHO14841 1288 aa15.06■□□□□ 0
CTC1-203ENST00000578240 YEATS4O95619 227 aa15.06■□□□□ 0
CTC1-203ENST00000578240 BACE1P56817 501 aa15.06■□□□□ 0
CTC1-203ENST00000578240 UBE2HP62256 183 aa15.06■□□□□ 0
CTC1-203ENST00000578240 SF3A1Q15459 793 aaKnown RBP15.06■□□□□ 0
CTC1-203ENST00000578240 MAP3K11Q16584 847 aa15.06■□□□□ 0
CTC1-203ENST00000578240 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
CTC1-203ENST00000578240 ZNF280CQ8ND82 737 aa15.06■□□□□ 0
CTC1-203ENST00000578240 LPAR1Q92633 364 aa15.06■□□□□ 0
CTC1-203ENST00000578240 C12orf42Q96LP6 360 aa15.06■□□□□ 0
CTC1-203ENST00000578240 PICK1Q9NRD5 415 aa15.06■□□□□ 0
CTC1-203ENST00000578240 CFAP45Q9UL16 551 aa15.06■□□□□ 0
CTC1-203ENST00000578240 PCDHB6Q9Y5E3 794 aa15.06■□□□□ 0
CTC1-203ENST00000578240 DDX49Q9Y6V7 483 aaKnown RBP15.06■□□□□ 0
CTC1-203ENST00000578240 WDR81Q562E7 1941 aa15.05■□□□□ -0
CTC1-203ENST00000578240 KIAA1217Q5T5P2 1943 aa15.05■□□□□ -0
CTC1-203ENST00000578240 TRIM75PA6NK02 468 aa15.05■□□□□ -0
CTC1-203ENST00000578240 PIK3AP1Q6ZUJ8 805 aa15.05■□□□□ -0
CTC1-203ENST00000578240 RANBP17Q9H2T7 1088 aaKnown RBP15.05■□□□□ -0
CTC1-203ENST00000578240 CREBZFQ9NS37 354 aa15.05■□□□□ -0
CTC1-203ENST00000578240 AFG3L2Q9Y4W6 797 aa15.05■□□□□ -0
CTC1-203ENST00000578240 ZHX2Q9Y6X8 837 aa15.05■□□□□ -0
CTC1-203ENST00000578240 PASKQ96RG2 1323 aa15.04■□□□□ -0
CTC1-203ENST00000578240 SMCO2A6NFE2 343 aa15.04■□□□□ -0
CTC1-203ENST00000578240 CLK2P49760 499 aaKnown RBP15.04■□□□□ -0
CTC1-203ENST00000578240 MAP3K9P80192 1104 aa15.04■□□□□ -0
CTC1-203ENST00000578240 RILPL1Q5EBL4 403 aa15.04■□□□□ -0
CTC1-203ENST00000578240 GALNT17Q6IS24 598 aa15.04■□□□□ -0
CTC1-203ENST00000578240 CCDC12Q8WUD4 166 aaPredicted RBP15.04■□□□□ -0
CTC1-203ENST00000578240 BRMS1Q9HCU9 246 aa15.04■□□□□ -0
CTC1-203ENST00000578240 TMEM63CQ9P1W3 806 aa15.04■□□□□ -0
CTC1-203ENST00000578240 LRRC37A2A6NM11 1700 aa15.04■□□□□ -0
CTC1-203ENST00000578240 ZNF536O15090 1300 aa15.04■□□□□ -0
CTC1-203ENST00000578240 EDIL3O43854 480 aa15.03■□□□□ -0
CTC1-203ENST00000578240 PPP1R12BO60237 982 aaPredicted RBP15.03■□□□□ -0
CTC1-203ENST00000578240 ITGBL1O95965 494 aaPredicted RBP15.03■□□□□ -0
CTC1-203ENST00000578240 HMGCS2P54868 508 aa15.03■□□□□ -0
CTC1-203ENST00000578240 IKQ13123 557 aaPredicted RBP15.03■□□□□ -0
CTC1-203ENST00000578240 SLC39A14Q15043 492 aa15.03■□□□□ -0
CTC1-203ENST00000578240 P2RX7Q99572 595 aaKnown RBP15.03■□□□□ -0
CTC1-203ENST00000578240 AS3MTQ9HBK9 375 aa15.03■□□□□ -0
CTC1-203ENST00000578240 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.03■□□□□ -0
CTC1-203ENST00000578240 TMEM260Q9NX78 707 aa15.03■□□□□ -0
CTC1-203ENST00000578240 FEM1BQ9UK73 627 aa15.03■□□□□ -0
CTC1-203ENST00000578240 MRVI1Q9Y6F6 885 aa15.03■□□□□ -0
CTC1-203ENST00000578240 ZNFX1Q9P2E3 1918 aaKnown RBP15.03■□□□□ -0
CTC1-203ENST00000578240 MBD3O95983 291 aa15.03■□□□□ -0
CTC1-203ENST00000578240 LIG1P18858 919 aa15.03■□□□□ -0
CTC1-203ENST00000578240 IREB2P48200 963 aaKnown RBP15.03■□□□□ -0
CTC1-203ENST00000578240 USP14P54578 494 aa15.03■□□□□ -0
CTC1-203ENST00000578240 CSPP1Q1MSJ5 1256 aa15.03■□□□□ -0
CTC1-203ENST00000578240 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
CTC1-203ENST00000578240 AXDND1Q5T1B0 1012 aaPredicted RBP15.03■□□□□ -0
CTC1-203ENST00000578240 FAM160B2Q86V87 743 aa15.03■□□□□ -0
CTC1-203ENST00000578240 KIFC2Q96AC6 838 aa15.03■□□□□ -0
CTC1-203ENST00000578240 WNK4Q96J92 1243 aa15.03■□□□□ -0
CTC1-203ENST00000578240 GOLPH3LQ9H4A5 285 aa15.03■□□□□ -0
CTC1-203ENST00000578240 C6orf50Q9HD87 102 aa15.03■□□□□ -0
CTC1-203ENST00000578240 RIC8AQ9NPQ8 531 aa15.03■□□□□ -0
CTC1-203ENST00000578240 PCDHA7Q9UN72 937 aa15.03■□□□□ -0
CTC1-203ENST00000578240 TMEM88BA6NKF7 163 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 SPTLC2O15270 562 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 ADCY7P51828 1080 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 STK38Q15208 465 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 UBE2SQ16763 222 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 USH1GQ495M9 461 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 TPRNQ4KMQ1 711 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 SH3D19Q5HYK7 790 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 FBXO11Q86XK2 927 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 REXO1Q8N1G1 1221 aaKnown RBP15.02□□□□□ -0.01
CTC1-203ENST00000578240 SLF1Q9BQI6 1058 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 AMNQ9BXJ7 453 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 RPAP3Q9H6T3 665 aaPredicted RBP15.02□□□□□ -0.01
CTC1-203ENST00000578240 ELP3Q9H9T3 547 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 PCDHA1Q9Y5I3 950 aa15.02□□□□□ -0.01
CTC1-203ENST00000578240 SPDYE5A6NIY4 337 aa15.01□□□□□ -0.01
CTC1-203ENST00000578240 MARCKSP29966 332 aaPredicted RBP15.01□□□□□ -0.01
CTC1-203ENST00000578240 GNA11P29992 359 aa15.01□□□□□ -0.01
CTC1-203ENST00000578240 GRIN1Q05586 938 aa15.01□□□□□ -0.01
CTC1-203ENST00000578240 INF2Q27J81 1249 aa15.01□□□□□ -0.01
CTC1-203ENST00000578240 LDLRAD1Q5T700 205 aa15.01□□□□□ -0.01
CTC1-203ENST00000578240 CAVIN1Q6NZI2 390 aaKnown RBP15.01□□□□□ -0.01
CTC1-203ENST00000578240 ANKRD13AQ8IZ07 590 aa15.01□□□□□ -0.01
CTC1-203ENST00000578240 JMYQ8N9B5 988 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms