RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 COPB2P35606 906 aa16.24■□□□□ 0.19
RPAIN-217ENST00000575711 STAT3P40763 770 aa16.24■□□□□ 0.19
RPAIN-217ENST00000575711 LACTBP83111 547 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-217ENST00000575711 CDC37Q16543 378 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-217ENST00000575711 SPZ1Q9BXG8 430 aa16.24■□□□□ 0.19
RPAIN-217ENST00000575711 MOV10L1Q9BXT6 1211 aaKnown RBP16.24■□□□□ 0.19
RPAIN-217ENST00000575711 RIOX1Q9H6W3 641 aa16.24■□□□□ 0.19
RPAIN-217ENST00000575711 JMJD4Q9H9V9 463 aa16.24■□□□□ 0.19
RPAIN-217ENST00000575711 CWC22Q9HCG8 908 aaKnown RBP16.24■□□□□ 0.19
RPAIN-217ENST00000575711 PNMA2Q9UL42 364 aa16.24■□□□□ 0.19
RPAIN-217ENST00000575711 SLC25A27O95847 323 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 ICAM1P05362 532 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 CDC27P30260 824 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 MAPK4P31152 587 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 FCGRTP55899 365 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 CCT2P78371 535 aaKnown RBP16.23■□□□□ 0.19
RPAIN-217ENST00000575711 STK3Q13188 491 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 ARHGEF6Q15052 776 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
RPAIN-217ENST00000575711 NBPF11Q86T75 865 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 RIOX2Q8IUF8 465 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 SRBD1Q8N5C6 995 aaKnown RBP16.23■□□□□ 0.19
RPAIN-217ENST00000575711 SHCBP1Q8NEM2 672 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 CD99L2Q8TCZ2 262 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 SLKQ9H2G2 1235 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-217ENST00000575711 CCPG1Q9ULG6 757 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 TPCN1Q9ULQ1 816 aa16.23■□□□□ 0.19
RPAIN-217ENST00000575711 ZNF536O15090 1300 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 CYTH3O43739 400 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 ECM2O94769 699 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-217ENST00000575711 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-217ENST00000575711 ADD1P35611 737 aaKnown RBP16.22■□□□□ 0.19
RPAIN-217ENST00000575711 PSMC4P43686 418 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
RPAIN-217ENST00000575711 WDR78Q5VTH9 848 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 HOMER1Q86YM7 354 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 CMTR1Q8N1G2 835 aaKnown RBP16.22■□□□□ 0.19
RPAIN-217ENST00000575711 CCDC82Q8N4S0 544 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 MTMR8Q96EF0 704 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
RPAIN-217ENST00000575711 PORCNQ9H237 461 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 EFCC1Q9HA90 598 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 FAM217BQ9NTX9 383 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-217ENST00000575711 LIMCH1Q9UPQ0 1083 aa16.22■□□□□ 0.19
RPAIN-217ENST00000575711 TNPO2O14787 897 aaKnown RBP16.21■□□□□ 0.19
RPAIN-217ENST00000575711 CPLX1O14810 134 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 ZBTB5O15062 677 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 ERCC3P19447 782 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 SLC35G1Q2M3R5 365 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 TKFCQ3LXA3 575 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 CPLX2Q6PUV4 134 aaKnown RBP16.21■□□□□ 0.19
RPAIN-217ENST00000575711 PIBF1Q8WXW3 757 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 AGBL1Q96MI9 1066 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 PIGSQ96S52 555 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 MROH8Q9H579 483 aa16.21■□□□□ 0.19
RPAIN-217ENST00000575711 NCOA5Q9HCD5 579 aaKnown RBP16.21■□□□□ 0.19
RPAIN-217ENST00000575711 SEC63Q9UGP8 760 aaKnown RBP16.21■□□□□ 0.19
RPAIN-217ENST00000575711 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 PNMA6FA0A0J9YX94 578 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 PFKFB2O60825 505 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 ALAS1P13196 640 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 MCM2P49736 904 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 SCRN1Q12765 414 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 ME3Q16798 604 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 FBXO11Q86XK2 927 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 CHST13Q8NET6 341 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 COA7Q96BR5 231 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 TRIM47Q96LD4 638 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 ZSCAN31Q96LW9 406 aaPredicted RBP16.2■□□□□ 0.18
RPAIN-217ENST00000575711 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 ARHGAP39Q9C0H5 1083 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 RIPK3Q9Y572 518 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 IVNS1ABPQ9Y6Y0 642 aa16.2■□□□□ 0.18
RPAIN-217ENST00000575711 GNRH1P01148 92 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 HOXD10P28358 340 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 CTGFP29279 349 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 TRAF1Q13077 416 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 USH1GQ495M9 461 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 GPR142Q7Z601 462 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 PLEKHH3Q7Z736 793 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 TRERF1Q96PN7 1200 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 ACAD9Q9H845 621 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 SH2B1Q9NRF2 756 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-217ENST00000575711 HOMER2Q9NSB8 354 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 RNF146Q9NTX7 359 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-217ENST00000575711 FBXO40Q9UH90 709 aa16.19■□□□□ 0.18
RPAIN-217ENST00000575711 COL11A1P12107 1806 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-217ENST00000575711 CDKL5O76039 1030 aa16.18■□□□□ 0.18
RPAIN-217ENST00000575711 LARGE1O95461 756 aa16.18■□□□□ 0.18
RPAIN-217ENST00000575711 IFNAR1P17181 557 aa16.18■□□□□ 0.18
RPAIN-217ENST00000575711 AKAP17AQ02040 695 aaKnown RBP16.18■□□□□ 0.18
RPAIN-217ENST00000575711 FUT2Q10981 343 aa16.18■□□□□ 0.18
RPAIN-217ENST00000575711 NECAB1Q8N987 351 aa16.18■□□□□ 0.18
RPAIN-217ENST00000575711 GTF3C6Q969F1 213 aa16.18■□□□□ 0.18
RPAIN-217ENST00000575711 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms