RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CCNT1O60563 726 aaKnown RBP12.62□□□□□ -0.39
RPAIN-212ENST00000573126 BTDP43251 543 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 CHMP4BP1P59074 171 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 ZNF804AQ7Z570 1209 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 CNBD1Q8NA66 436 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 RTFDC1Q9BY42 306 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-212ENST00000573126 LEMD3Q9Y2U8 911 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 H7C1D1 291 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 KLRC4O43908 158 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 FECHP22830 423 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 GSTO1P78417 241 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 TXNRD1Q16881 649 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 CYP26C1Q6V0L0 522 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 RABGGTAQ92696 567 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 EYA3Q99504 573 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 KBTBD4Q9NVX7 518 aa12.62□□□□□ -0.39
RPAIN-212ENST00000573126 TTF2Q9UNY4 1162 aaKnown RBP12.62□□□□□ -0.39
RPAIN-212ENST00000573126 TBC1D8O95759 1140 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 PLCG1P19174 1290 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 CDK8P49336 464 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 TMED8Q6PL24 325 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-212ENST00000573126 DAGLBQ8NCG7 672 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 CTAGE9A4FU28 777 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 PSMA7O14818 248 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 UFL1O94874 794 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 PPP4CP60510 307 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 SRGAP1Q7Z6B7 1085 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 TEX11Q8IYF3 940 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 ARFGAP3Q9NP61 516 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 TRIM10Q9UDY6 481 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 CDC23Q9UJX2 597 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 CCDC88AQ3V6T2 1871 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 SMCO2A6NFE2 343 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-212ENST00000573126 ARHGAP25P42331 645 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 GPSM2P81274 684 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 TRIM14Q14142 442 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 CCDC178Q5BJE1 867 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 ZBTB9Q96C00 473 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 CCSER1Q9C0I3 900 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 ZMYND12Q9H0C1 365 aa12.61□□□□□ -0.39
RPAIN-212ENST00000573126 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
RPAIN-212ENST00000573126 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 RHOBTB3O94955 611 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 TECP42680 631 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 STIM1Q13586 685 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 KCNB1Q14721 858 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 VPS72Q15906 364 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 GALNT17Q6IS24 598 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 CABP7Q86V35 215 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 GIMAP8Q8ND71 665 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-212ENST00000573126 CEP95Q96GE4 821 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 UBA5Q9GZZ9 404 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 CD209Q9NNX6 404 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 TFR2Q9UP52 801 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 FLT1P17948 1338 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 MAST2Q6P0Q8 1798 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 B4DLN1 442 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 LDHCP07864 332 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 NONOQ15233 471 aaKnown RBP eCLIP12.6□□□□□ -0.39
RPAIN-212ENST00000573126 TTI2Q6NXR4 508 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 CSGALNACT2Q8N6G5 542 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 PIGSQ96S52 555 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 GUCA1BQ9UMX6 200 aa12.6□□□□□ -0.39
RPAIN-212ENST00000573126 LUC7L2Q9Y383 392 aaKnown RBP12.6□□□□□ -0.39
RPAIN-212ENST00000573126 SNED1Q8TER0 1413 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 ERICH4A6NGS2 130 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 NDUFA10O95299 355 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 FCER1AP12319 257 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 ASIC1P78348 528 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 STK4Q13043 487 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 JAKMIP3Q5VZ66 844 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 RPGRQ92834 1020 aaKnown RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 SPZ1Q9BXG8 430 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 TRIM9Q9C026 710 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 ZNF287Q9HBT7 754 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 MAGEC2Q9UBF1 373 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 SEC63Q9UGP8 760 aaKnown RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 REXO2Q9Y3B8 237 aaKnown RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 MYH8P13535 1937 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 LAD1O00515 517 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 EEF1GP26641 437 aaKnown RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 PRPHP41219 470 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 PDE4DQ08499 809 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 MFSD14BQ5SR56 506 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 C16orf86Q6ZW13 317 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 OR8K1Q8NGG5 319 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 TBCKQ8TEA7 893 aa12.59□□□□□ -0.39
RPAIN-212ENST00000573126 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms