RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 APPBP2Q92624 585 aa8.91□□□□□ -0.98
NUP88-205ENST00000572809 OSBP2Q969R2 916 aa8.91□□□□□ -0.98
NUP88-205ENST00000572809 COA7Q96BR5 231 aa8.91□□□□□ -0.98
NUP88-205ENST00000572809 FEZ1Q99689 392 aa8.91□□□□□ -0.98
NUP88-205ENST00000572809 KIAA1683Q9H0B3 1180 aa8.91□□□□□ -0.98
NUP88-205ENST00000572809 RWDD1Q9H446 243 aaPredicted RBP8.91□□□□□ -0.98
NUP88-205ENST00000572809 GDPD2Q9HCC8 539 aa8.91□□□□□ -0.98
NUP88-205ENST00000572809 MORF4L1Q9UBU8 362 aa8.91□□□□□ -0.98
NUP88-205ENST00000572809 BIN2Q9UBW5 565 aaPredicted RBP8.91□□□□□ -0.98
NUP88-205ENST00000572809 LOC100996750A0A140TA64 210 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 GSG1L2A8MUP6 293 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L15C9J2P7 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L13C9JLJ4 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L11C9JVI0 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L18D6R9N7 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L22D6RA61 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L17D6RBQ6 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L19D6RCP7 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L20D6RJB6 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 ADCY3O60266 1144 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 EN2P19622 333 aaPredicted RBP8.9□□□□□ -0.98
NUP88-205ENST00000572809 HERVK_113P62684 666 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 USP17L24Q0WX57 530 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 GIMAP6Q6P9H5 292 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 CATSPERGQ6ZRH7 1159 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 TMEM179Q6ZVK1 233 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 SLC44A5Q8NCS7 719 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 GPRC5AQ8NFJ5 357 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 EXOC6Q8TAG9 804 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
NUP88-205ENST00000572809 C12orf42Q96LP6 360 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 CCDC17Q96LX7 622 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 KRTAP4-6Q9BYQ5 205 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 RBPJLQ9UBG7 517 aa8.9□□□□□ -0.98
NUP88-205ENST00000572809 SUPT16HQ9Y5B9 1047 aaKnown RBP8.9□□□□□ -0.98
NUP88-205ENST00000572809 ZSWIM8A7E2V4 1837 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 A0A1W2PRG0 241 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 MINDY4BA8MYZ0 360 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 PATL2C9JE40 543 aaKnown RBP8.89□□□□□ -0.99
NUP88-205ENST00000572809 SMIM22K7EJ46 135 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 GPAA1O43292 621 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 APPP05067 770 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 AKR1B1P15121 316 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 GNAT2P19087 354 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 ABL2P42684 1182 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 PDE1AP54750 535 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 UBXN2AP68543 259 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 IRF5Q13568 498 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 MTFR1Q15390 333 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 Q3C1V9 767 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 SBK1Q52WX2 424 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 C16orf86Q6ZW13 317 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 CCAR1Q8IX12 1150 aaKnown RBP8.89□□□□□ -0.99
NUP88-205ENST00000572809 FSD1Q9BTV5 496 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 TXNRD2Q9NNW7 524 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 ARPP21Q9UBL0 812 aaPredicted RBP8.89□□□□□ -0.99
NUP88-205ENST00000572809 STAP2Q9UGK3 403 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 GJD2Q9UKL4 321 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 LOC285556D6RIA3 1793 aa8.89□□□□□ -0.99
NUP88-205ENST00000572809 SALL3Q9BXA9 1300 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 M0R2C6 588 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 PEX10O60683 326 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 IGHDP01880 384 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 CCL5P13501 91 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 VCAM1P19320 739 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 GMPRP36959 345 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 ERVK-9P63128 1117 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 ERVK-24P63145 666 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 ZMYM1Q5SVZ6 1142 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 B4GALNT3Q6L9W6 998 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 SIAH1Q8IUQ4 282 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 SMC5Q8IY18 1101 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 IFNL3Q8IZI9 196 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 STK11IPQ8N1F8 1099 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 GTF3C2Q8WUA4 911 aaPredicted RBP8.88□□□□□ -0.99
NUP88-205ENST00000572809 TSC1Q92574 1164 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 EVI5LQ96CN4 794 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 SEC62Q99442 399 aaKnown RBP8.88□□□□□ -0.99
NUP88-205ENST00000572809 PAGR1Q9BTK6 254 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 RPAP3Q9H6T3 665 aaPredicted RBP8.88□□□□□ -0.99
NUP88-205ENST00000572809 KANSL2Q9H9L4 492 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 MKNK2Q9HBH9 465 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 ARHGEF10LQ9HCE6 1279 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 HOXC10Q9NYD6 342 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 TMX2Q9Y320 296 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 RABGAP1Q9Y3P9 1069 aa8.88□□□□□ -0.99
NUP88-205ENST00000572809 MGAMO43451 1857 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 NAV1Q8NEY1 1877 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 ELNP15502 786 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 MAPK4P31152 587 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 TDO2P48775 406 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 ATP2B2Q01814 1243 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 ICA1Q05084 483 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 CTDSPL2Q05D32 466 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 COG2Q14746 738 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 LBX2Q6XYB7 198 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 ZNF444Q8N0Y2 327 aaPredicted RBP8.87□□□□□ -0.99
NUP88-205ENST00000572809 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
NUP88-205ENST00000572809 HLA-CQ95604 372 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms