RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ARHGEF6Q15052 776 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 NOM1Q5C9Z4 860 aaKnown RBP16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 SNRNP48Q6IEG0 339 aaKnown RBP16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 TMTC3Q6ZXV5 915 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 NCAPG2Q86XI2 1143 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 CMTR1Q8N1G2 835 aaKnown RBP16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 TEX13BQ9BXU2 312 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 JMJD4Q9H9V9 463 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 PNMA2Q9UL42 364 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 TPCN1Q9ULQ1 816 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 LIMCH1Q9UPQ0 1083 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 PLXNB2O15031 1838 aa16.84■□□□□ 0.29
NPLOC4-209ENST00000572760 FMNL1O95466 1100 aaPredicted RBP16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 SLC25A27O95847 323 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 CDC27P30260 824 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 COPB2P35606 906 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 ADD1P35611 737 aaKnown RBP16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 LBX1P52954 281 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 POTEEQ6S8J3 1075 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 SRBD1Q8N5C6 995 aaKnown RBP16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 REPS2Q8NFH8 660 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 RRP36Q96EU6 259 aaKnown RBP16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 ZSCAN31Q96LW9 406 aaPredicted RBP16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 SPZ1Q9BXG8 430 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 RIOX1Q9H6W3 641 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 SEC63Q9UGP8 760 aaKnown RBP16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 CCPG1Q9ULG6 757 aa16.83■□□□□ 0.28
NPLOC4-209ENST00000572760 ZSWIM8A7E2V4 1837 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 ALAS1P13196 640 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 MAPK4P31152 587 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 MCM2P49736 904 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 FCGRTP55899 365 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 AKAP17AQ02040 695 aaKnown RBP16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 NBPF11Q86T75 865 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 RIOX2Q8IUF8 465 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 CD99L2Q8TCZ2 262 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 AGBL1Q96MI9 1066 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 PIGSQ96S52 555 aa16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 MOV10L1Q9BXT6 1211 aaKnown RBP16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 NCOA5Q9HCD5 579 aaKnown RBP16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 ZNF214Q9UL59 606 aaPredicted RBP16.82■□□□□ 0.28
NPLOC4-209ENST00000572760 NID2Q14112 1375 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 TNPO2O14787 897 aaKnown RBP16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 ATP2A1O14983 1001 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 ZBTB5O15062 677 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 CYTH3O43739 400 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 PFKFB2O60825 505 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 ICAM1P05362 532 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 ERCC3P19447 782 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 PSMC4P43686 418 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 TRAF1Q13077 416 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 ME3Q16798 604 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 USH1GQ495M9 461 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 FBXO11Q86XK2 927 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 SHCBP1Q8NEM2 672 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 COA7Q96BR5 231 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 AMNQ9BXJ7 453 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 MROH8Q9H579 483 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 EFCC1Q9HA90 598 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 FAM217BQ9NTX9 383 aaPredicted RBP16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 IVNS1ABPQ9Y6Y0 642 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
NPLOC4-209ENST00000572760 ZNF536O15090 1300 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 PNMA6FA0A0J9YX94 578 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 CDKL5O76039 1030 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 SCRN1Q12765 414 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 TKFCQ3LXA3 575 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 TRIM22Q8IYM9 498 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 PORCNQ9H237 461 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 SH2B1Q9NRF2 756 aaPredicted RBP16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 HOMER2Q9NSB8 354 aa16.8■□□□□ 0.28
NPLOC4-209ENST00000572760 CNTNAP5Q8WYK1 1306 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 LARGE1O95461 756 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 HOXD10P28358 340 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 SLC35G1Q2M3R5 365 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 PLEKHH3Q7Z736 793 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 CHST13Q8NET6 341 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 MTMR8Q96EF0 704 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 TRERF1Q96PN7 1200 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 SLC26A6Q9BXS9 759 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 ARHGAP39Q9C0H5 1083 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 RNF146Q9NTX7 359 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 FBXO40Q9UH90 709 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 V9GY48 417 aaPredicted RBP16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 PLXNA1Q9UIW2 1896 aa16.79■□□□□ 0.28
NPLOC4-209ENST00000572760 ABCB11O95342 1321 aa16.78■□□□□ 0.28
NPLOC4-209ENST00000572760 hCG_1642624A0A1W2PR95 340 aa16.78■□□□□ 0.28
NPLOC4-209ENST00000572760 IFNAR1P17181 557 aa16.78■□□□□ 0.28
NPLOC4-209ENST00000572760 GPR142Q7Z601 462 aa16.78■□□□□ 0.28
NPLOC4-209ENST00000572760 PHKBQ93100 1093 aa16.78■□□□□ 0.28
NPLOC4-209ENST00000572760 GTF3C6Q969F1 213 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms