RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 REPS2Q8NFH8 660 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 CHURC1Q8WUH1 139 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 CCDC102AQ96A19 550 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 ASCC2Q9H1I8 757 aaPredicted RBP11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 SPDYE16A6NNV3 312 aaPredicted RBP11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 VWA5AO00534 786 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 ADAMTS3O15072 1205 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 AOC2O75106 756 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 CDKL5O76039 1030 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 PFKFB3Q16875 520 aaPredicted RBP11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 OTUD7BQ6GQQ9 843 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 ANKRD23Q86SG2 305 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 FAM160B2Q86V87 743 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 GPKOWQ92917 476 aaPredicted RBP eCLIP11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
TOM1L1-210ENST00000572158 MYH6P13533 1939 aa11.27□□□□□ -0.6
TOM1L1-210ENST00000572158 A0A0G2JMZ2 1700 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 PNMA6FA0A0J9YX94 578 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 PDHXO00330 501 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 ZBTB5O15062 677 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 CNMDO75829 334 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 DEXIO95424 95 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 CYP2C8P10632 490 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 SCG2P13521 617 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 KIF23Q02241 960 aaPredicted RBP11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 IKQ13123 557 aaPredicted RBP11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 GRM1Q13255 1194 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 PKP1Q13835 747 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 CDC37Q16543 378 aaPredicted RBP11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 RRP36Q96EU6 259 aaKnown RBP11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 CAPNS2Q96L46 248 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 SLC38A10Q9HBR0 1119 aa11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 COL11A1P12107 1806 aaPredicted RBP11.27□□□□□ -0.61
TOM1L1-210ENST00000572158 MANSC4A6NHS7 340 aaPredicted RBP11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 HSP90AA1P07900 732 aaKnown RBP11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 TM4SF4P48230 202 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 VEGFBP49765 207 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 HMGN5P82970 282 aaKnown RBP11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 NPY5RQ15761 445 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 LBX2Q6XYB7 198 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 TRIM22Q8IYM9 498 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 COA7Q96BR5 231 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 AGBL1Q96MI9 1066 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 R3HDMLQ9H3Y0 253 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 TXNRD2Q9NNW7 524 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 HOXC10Q9NYD6 342 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 BTBD7Q9P203 1132 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 RBPJLQ9UBG7 517 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 SLC45A1Q9Y2W3 748 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 PCNTO95613 3336 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 MYPNQ86TC9 1320 aa11.26□□□□□ -0.61
TOM1L1-210ENST00000572158 STXBP3O00186 592 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 OPLAHO14841 1288 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 SYT1P21579 422 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 FOSBP53539 338 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 C1QTNF8P60827 252 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 HERVK_113P62684 666 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 TMEM132BQ14DG7 1078 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 CCDC174Q6PII3 467 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 HOMEZQ8IX15 550 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 RAVER2Q9HCJ3 691 aaKnown RBP11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 BARHL2Q9NY43 387 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 VPS54Q9P1Q0 977 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 ZNF214Q9UL59 606 aaPredicted RBP11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 ZDHHC9Q9Y397 364 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 WDR33Q9C0J8 1336 aaKnown RBP11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 ICAM1P05362 532 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 IRX3P78415 501 aaPredicted RBP11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 NOGQ13253 232 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 Q3C1V9 767 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 LARP1BQ659C4 914 aaKnown RBP11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 KRT40Q6A162 431 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 FBXO18Q8NFZ0 1043 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 CWC22Q9HCG8 908 aaKnown RBP11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 KCNJ14Q9UNX9 436 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 RIPK3Q9Y572 518 aa11.25□□□□□ -0.61
TOM1L1-210ENST00000572158 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 ATP2A1O14983 1001 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 OSBPP22059 807 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 INHBEP58166 350 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 AKAP17AQ02040 695 aaKnown RBP11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 GUCY1B3Q02153 619 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 USH1GQ495M9 461 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 FBXO11Q86XK2 927 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 PHF20Q9BVI0 1012 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms