RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 PPP1R12BO60237 982 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 PPP1R11O60927 126 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 FDX1P10109 184 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 SLC16A2P36021 539 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 MRPL12P52815 198 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 BACE1P56817 501 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 SF3A1Q15459 793 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 QRICH1Q2TAL8 776 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 AXDND1Q5T1B0 1012 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 KRT25Q7Z3Z0 450 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 HOMER1Q86YM7 354 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 ZNF280CQ8ND82 737 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 AMNQ9BXJ7 453 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.393e-7■■■□□ 17.7
NPLOC4-203ENST00000570300 RANBP17Q9H2T7 1088 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 PNMA2Q9UL42 364 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 PRR12Q9ULL5 1215 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 PCDHA7Q9UN72 937 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 PCDHA6Q9UN73 950 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 SCAF8Q9UPN6 1271 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 PCDHA8Q9Y5H6 950 aa12.59□□□□□ -0.39
NPLOC4-203ENST00000570300 CMA1P23946 247 aa12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 ME1P48163 572 aa12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 CLK2P49760 499 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 ADCY7P51828 1080 aa12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 ZNF445P59923 1031 aa12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 CDC37Q16543 378 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 EARS2Q5JPH6 523 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 FAM83BQ5T0W9 1011 aa12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 REXO1Q8N1G1 1221 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 GLIS2Q9BZE0 524 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 TMEM63CQ9P1W3 806 aa12.58□□□□□ -0.4
NPLOC4-203ENST00000570300 CCDC194A0A1B0GVG4 234 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 CUTAO60888 179 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 LETM1O95202 739 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 PTPREP23469 700 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 NF2P35240 595 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 CEBPZQ03701 1054 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 GSE1Q14687 1217 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 SH3D19Q5HYK7 790 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 CCDC183Q5T5S1 534 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 ARL6IP4Q66PJ3 421 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 CAVIN1Q6NZI2 390 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 PRPF38AQ8NAV1 312 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 ENGASEQ8NFI3 743 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 CUL5Q93034 780 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 FERMT2Q96AC1 680 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 FEZ1Q99689 392 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 DDX19AQ9NUU7 478 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 PCDHB6Q9Y5E3 794 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 PCDHA1Q9Y5I3 950 aa12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 SRPRBQ9Y5M8 271 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-203ENST00000570300 ADM5C9JUS6 153 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 PIK3CDO00329 1044 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 LAD1O00515 517 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 ADAMTS3O15072 1205 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 IREB2P48200 963 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 ATP2C1P98194 919 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 NONOQ15233 471 aaKnown RBP eCLIP12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 TTC38Q5R3I4 469 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 PIK3AP1Q6ZUJ8 805 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 FBXO11Q86XK2 927 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 SPICE1Q8N0Z3 855 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 KRI1Q8N9T8 703 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 MRPS27Q92552 414 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 COA7Q96BR5 231 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 CDCA5Q96FF9 252 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 MAF1Q9H063 256 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 AFG3L2Q9Y4W6 797 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 SNCAIPQ9Y6H5 919 aa12.56□□□□□ -0.4
NPLOC4-203ENST00000570300 FAM205CA6NFA0 338 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 RAD21O60216 631 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 LIG1P18858 919 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 VCAM1P19320 739 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 GHRHRQ02643 423 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 SPP2Q13103 211 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 AP3B2Q13367 1082 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 SNW1Q13573 536 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 ZSCAN23Q3MJ62 389 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 CCAR1Q8IX12 1150 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 SAMD3Q8N6K7 520 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 C4orf32Q8N8J7 132 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 SLF1Q9BQI6 1058 aa12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-203ENST00000570300 FBXO2Q9UK22 296 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms