RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 TINF2Q9BSI4 451 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 ZNRF3Q9ULT6 936 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 UBR2Q8IWV8 1755 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 SCN7AQ01118 1682 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 PDE4DIPQ5VU43 2346 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 KIF7Q2M1P5 1343 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 H7C1D1 291 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 M0R082 166 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 TNRC18O15417 2968 aaPredicted RBP7.89□□□□□ -1.15
UBFD1-209ENST00000569919 PPIP5K2O43314 1243 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 LILRB5O75023 590 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 B3GALT4O96024 378 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 BCRP11274 1271 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 ESRRAP11474 423 aaPredicted RBP7.89□□□□□ -1.15
UBFD1-209ENST00000569919 CDC25BP30305 580 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 GMPRP36959 345 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 LIG3P49916 1009 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 KIF23Q02241 960 aaPredicted RBP7.89□□□□□ -1.15
UBFD1-209ENST00000569919 PPP2R3AQ06190 1150 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 IKBKEQ14164 716 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 LCE2CQ5TA81 110 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 C8orf86Q6ZUL3 223 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 CHSY3Q70JA7 882 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 C2orf69Q8N8R5 385 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 ZNF417Q8TAU3 575 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 ZNF587Q96SQ5 575 aaPredicted RBP7.89□□□□□ -1.15
UBFD1-209ENST00000569919 RNF186Q9NXI6 227 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 INPP5FQ9Y2H2 1132 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 LTBP1Q14766 1721 aa7.89□□□□□ -1.15
UBFD1-209ENST00000569919 NPC1L1Q9UHC9 1359 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 CDHR2Q9BYE9 1310 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 ERVV-1B6SEH8 477 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 SHISA8B8ZZ34 492 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 SOX1O00570 391 aaPredicted RBP7.88□□□□□ -1.15
UBFD1-209ENST00000569919 KCNQ3O43525 872 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 PIP4K2AP48426 406 aaPredicted RBP7.88□□□□□ -1.15
UBFD1-209ENST00000569919 GMPSP49915 693 aaPredicted RBP7.88□□□□□ -1.15
UBFD1-209ENST00000569919 HLFQ16534 295 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 TTBK2Q6IQ55 1244 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 PHC3Q8NDX5 983 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 CNOT7Q9UIV1 285 aaKnown RBP7.88□□□□□ -1.15
UBFD1-209ENST00000569919 TLR6Q9Y2C9 796 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 PPME1Q9Y570 386 aa7.88□□□□□ -1.15
UBFD1-209ENST00000569919 SNED1Q8TER0 1413 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 FAM155AB1AL88 458 aaPredicted RBP7.87□□□□□ -1.15
UBFD1-209ENST00000569919 H3BRJ5 948 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 TCERG1O14776 1098 aaKnown RBP7.87□□□□□ -1.15
UBFD1-209ENST00000569919 WFS1O76024 890 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 CELA2BP08218 269 aaPredicted RBP7.87□□□□□ -1.15
UBFD1-209ENST00000569919 GNL2Q13823 731 aaKnown RBP7.87□□□□□ -1.15
UBFD1-209ENST00000569919 AOC3Q16853 763 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 PCNX4Q63HM2 1172 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 LYPD4Q6UWN0 246 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 SREK1Q8WXA9 508 aaKnown RBP7.87□□□□□ -1.15
UBFD1-209ENST00000569919 SPON2Q9BUD6 331 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 RTFDC1Q9BY42 306 aaPredicted RBP7.87□□□□□ -1.15
UBFD1-209ENST00000569919 GBA2Q9HCG7 927 aaPredicted RBP7.87□□□□□ -1.15
UBFD1-209ENST00000569919 ADAMTS1Q9UHI8 967 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 ATP6V0A2Q9Y487 856 aa7.87□□□□□ -1.15
UBFD1-209ENST00000569919 LINC01387J3KSC0 135 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 BBOX1O75936 387 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 AMPD1P23109 780 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 EIF4A3P38919 411 aaKnown RBP7.86□□□□□ -1.15
UBFD1-209ENST00000569919 PAK2Q13177 524 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 TXNDC11Q6PKC3 985 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 AGMOQ6ZNB7 445 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 SLC43A3Q8NBI5 491 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 DCPSQ96C86 337 aaKnown RBP7.86□□□□□ -1.15
UBFD1-209ENST00000569919 HDAC9Q9UKV0 1011 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 SAMM50Q9Y512 469 aa7.86□□□□□ -1.15
UBFD1-209ENST00000569919 CEMIPQ8WUJ3 1361 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 BCORQ6W2J9 1755 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 PRAMEF22A3QJZ6 481 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 U2SURPO15042 1029 aaKnown RBP7.85□□□□□ -1.15
UBFD1-209ENST00000569919 PF4P02776 101 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 BMP6P22004 513 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 NME2P22392 152 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 RPS26P62854 115 aaKnown RBP7.85□□□□□ -1.15
UBFD1-209ENST00000569919 FAM160A1Q05DH4 1040 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 KIAA2012Q0VF49 1180 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 CAMK2GQ13555 558 aaPredicted RBP7.85□□□□□ -1.15
UBFD1-209ENST00000569919 HABP4Q5JVS0 413 aaKnown RBP7.85□□□□□ -1.15
UBFD1-209ENST00000569919 HGSNATQ68CP4 663 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 DPP8Q6V1X1 898 aaPredicted RBP7.85□□□□□ -1.15
UBFD1-209ENST00000569919 KRT26Q7Z3Y9 468 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 PPP1R42Q7Z4L9 355 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 WFDC8Q8IUA0 241 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 KIAA0825Q8IV33 1275 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 SULF2Q8IWU5 870 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 SP8Q8IXZ3 490 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 STK35Q8TDR2 534 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 WHAMMQ8TF30 809 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 ZNF296Q8WUU4 475 aaPredicted RBP7.85□□□□□ -1.15
UBFD1-209ENST00000569919 SLC7A3Q8WY07 619 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 RTF1Q92541 710 aaKnown RBP7.85□□□□□ -1.15
UBFD1-209ENST00000569919 DPF2Q92785 391 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 RHOVQ96L33 236 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 DRC1Q96MC2 740 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 PRDM6Q9NQX0 595 aa7.85□□□□□ -1.15
UBFD1-209ENST00000569919 COL4A5P29400 1685 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms