RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 B4GALNT3Q6L9W6 998 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-219ENST00000569882 CCAR1Q8IX12 1150 aaKnown RBP5.79□□□□□ -1.48
CNOT1-219ENST00000569882 SIRT2Q8IXJ6 389 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 SMCR8Q8TEV9 937 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-219ENST00000569882 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.79□□□□□ -1.48
CNOT1-219ENST00000569882 GCC1Q96CN9 775 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 ERO1AQ96HE7 468 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 SPOCK3Q9BQ16 436 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 FSD1Q9BTV5 496 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 OSBPL3Q9H4L5 887 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 ANTXR1Q9H6X2 564 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 CWC22Q9HCG8 908 aaKnown RBP5.79□□□□□ -1.48
CNOT1-219ENST00000569882 CABP5Q9NP86 173 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 DDX4Q9NQI0 724 aaKnown RBP5.79□□□□□ -1.48
CNOT1-219ENST00000569882 RAB6BQ9NRW1 208 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 MCM9Q9NXL9 1143 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 TMOD4Q9NZQ9 345 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 HERC5Q9UII4 1024 aaKnown RBP5.79□□□□□ -1.48
CNOT1-219ENST00000569882 PALD1Q9ULE6 856 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 ZHX2Q9Y6X8 837 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 CDK5RAP2Q96SN8 1893 aa5.79□□□□□ -1.48
CNOT1-219ENST00000569882 FOCADQ5VW36 1801 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 FLT1P17948 1338 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 DDTLA6NHG4 134 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 GPR25O00155 361 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 RAD21O60216 631 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 TRAK2O60296 914 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 CTNND1O60716 968 aaKnown RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 GLRX3O76003 335 aaKnown RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 MBD4O95243 580 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 ASNSP08243 561 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 MX1P20591 662 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 RHBDL3P58872 404 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 DYNLL1P63167 89 aaKnown RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 IRX6P78412 446 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 PABPC4Q13310 644 aaKnown RBP eCLIP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 TSHZ3Q63HK5 1081 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 ZNF385CQ66K41 422 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 FASTKD5Q7L8L6 764 aaKnown RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 CTU1Q7Z7A3 348 aaKnown RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 ZFPM1Q8IX07 1006 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 UBE2Q2Q8WVN8 375 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 PARK7Q99497 189 aaKnown RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 HAUS7Q99871 368 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 DCTPP1Q9H773 170 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 GDPD2Q9HCC8 539 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 ARHGEF10LQ9HCE6 1279 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 ISY1Q9ULR0 285 aaKnown RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 SNCAIPQ9Y6H5 919 aa5.78□□□□□ -1.48
CNOT1-219ENST00000569882 BAZ2AQ9UIF9 1905 aaKnown RBP5.78□□□□□ -1.48
CNOT1-219ENST00000569882 TTC41PQ6P2S7 1318 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 PCNTO95613 3336 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 USP17L5A8MUK1 530 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 PDHXO00330 501 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 IGF2BP3O00425 579 aaKnown RBP eCLIP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 ZFYP08048 801 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 TDO2P48775 406 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 MCCD1P59942 119 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 IRX3P78415 501 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 SP3Q02447 781 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 VAC14Q08AM6 782 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 POU4F2Q12837 409 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 CRHR2Q13324 411 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 RAB3GAP1Q15042 981 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 PKN2Q16513 984 aaKnown RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 NOL9Q5SY16 702 aaKnown RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 ADGRA1Q86SQ6 560 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 FOXP4Q8IVH2 680 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 EXOC6Q8TAG9 804 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 ZNF296Q8WUU4 475 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 RILPL2Q969X0 211 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 EDC3Q96F86 508 aaKnown RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 NACAP1Q9BZK3 213 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 LNPKQ9C0E8 428 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 MCOLN1Q9GZU1 580 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 ARMT1Q9H993 441 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 SERPINB13Q9UIV8 391 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 TRIM17Q9Y577 477 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 SLC4A4Q9Y6R1 1079 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 ATRNL1Q5VV63 1379 aa5.77□□□□□ -1.49
CNOT1-219ENST00000569882 COL2A1P02458 1487 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-219ENST00000569882 BTBD19C9JJ37 291 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 CXCL11O14625 94 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 STAU1O95793 577 aaKnown RBP5.76□□□□□ -1.49
CNOT1-219ENST00000569882 SLC3A2P08195 630 aaKnown RBP5.76□□□□□ -1.49
CNOT1-219ENST00000569882 PTPRAP18433 802 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 HOXD10P28358 340 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 ADD2P35612 726 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 CAP2P40123 477 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 ABL2P42684 1182 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 ATP2B2Q01814 1243 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 SPP2Q13103 211 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 CLN3Q13286 438 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 HDAC1Q13547 482 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-219ENST00000569882 UBE3CQ15386 1083 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 ZYXQ15942 572 aaKnown RBP5.76□□□□□ -1.49
CNOT1-219ENST00000569882 ABCB5Q2M3G0 1257 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 PLA2G4EQ3MJ16 856 aa5.76□□□□□ -1.49
CNOT1-219ENST00000569882 CERKLQ49MI3 558 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms