RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 MCM7P33993 719 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 FUCA2Q9BTY2 467 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 ESYT2A0FGR8 921 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 CUTAO60888 179 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 PTPREP23469 700 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 SYDE2Q5VT97 1194 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 SYNPO2Q9UMS6 1093 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 RESP18Q5W5W9 173 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 TSPY26PQ9H489 355 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 VCPKMTQ9H867 229 aa12.5□□□□□ -0.41
PDXDC1-216ENST00000569715 GNA11P29992 359 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 ADCY7P51828 1080 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 PTGDRQ13258 359 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 UBE2SQ16763 222 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 FAM177A1Q8N128 213 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 REXO1Q8N1G1 1221 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 ERCC4Q92889 916 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 CEP131Q9UPN4 1083 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 KINO60870 393 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 LMOD1P29536 600 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 TRAPPC10P48553 1259 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 RBM43Q6ZSC3 357 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 RNF214Q8ND24 703 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 ZKSCAN4Q969J2 545 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 ADARB2Q9NS39 739 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 HPSEQ9Y251 543 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 CTNND1O60716 968 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 LETM1O95202 739 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 MRE11P49959 708 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 GPR162Q16538 588 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 BTNL9Q6UXG8 535 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 FEZ1Q99689 392 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 CSRNP2Q9H175 543 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 PRR12Q9ULL5 1215 aa12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-216ENST00000569715 ATP2C1P98194 919 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 L1TD1Q5T7N2 865 aaKnown RBP12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 WRNIP1Q96S55 665 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 FBXO28Q9NVF7 368 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 MYH7BA7E2Y1 1941 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 PHIPQ8WWQ0 1821 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 STAT2P52630 851 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 PPP1R18Q6NYC8 613 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 PCDHA1Q9Y5I3 950 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 ADM5C9JUS6 153 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 ZNF202O95125 648 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 PRKG1Q13976 671 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 IL17AQ16552 155 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 USH1GQ495M9 461 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 DCAF15Q66K64 600 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 KRT25Q7Z3Z0 450 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 RIC8AQ9NPQ8 531 aa12.48□□□□□ -0.41
PDXDC1-216ENST00000569715 A0A087WWV3 80 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 NONOQ15233 471 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 C4orf32Q8N8J7 132 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 TMEM60Q9H2L4 133 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 SH2D4AQ9H788 454 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 SYKP43405 635 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 KIFC2Q96AC6 838 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
PDXDC1-216ENST00000569715 VWA3AA6NCI4 1184 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 EDIL3O43854 480 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 CLK2P49760 499 aaKnown RBP12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 MTMR2Q13614 643 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 LETM2Q2VYF4 491 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 KCNH3Q9ULD8 1083 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 MORC2Q9Y6X9 1032 aaPredicted RBP12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 PITPNM2Q9BZ72 1349 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 BMP15O95972 392 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 TYRO3Q06418 890 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 SCYL3Q8IZE3 742 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 CUL5Q93034 780 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 EPSTI1Q96J88 318 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 PSTPIP2Q9H939 334 aa12.46□□□□□ -0.41
PDXDC1-216ENST00000569715 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.42
PDXDC1-216ENST00000569715 FBXO11Q86XK2 927 aa12.46□□□□□ -0.42
PDXDC1-216ENST00000569715 AMNQ9BXJ7 453 aa12.46□□□□□ -0.42
PDXDC1-216ENST00000569715 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.42
PDXDC1-216ENST00000569715 A0A087X0B3 334 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms