RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MORF4L1Q9UBU8 362 aa27.15■■□□□ 1.94
RAB40C-212ENST00000569575 CNTNAP5Q8WYK1 1306 aa27.15■■□□□ 1.94
RAB40C-212ENST00000569575 DEXIO95424 95 aa27.14■■□□□ 1.94
RAB40C-212ENST00000569575 ICAM1P05362 532 aa27.14■■□□□ 1.94
RAB40C-212ENST00000569575 CCNA1P78396 465 aa27.14■■□□□ 1.94
RAB40C-212ENST00000569575 NOM1Q5C9Z4 860 aaKnown RBP27.14■■□□□ 1.94
RAB40C-212ENST00000569575 CCDC83Q8IWF9 413 aa27.14■■□□□ 1.94
RAB40C-212ENST00000569575 RGS22Q8NE09 1264 aa27.14■■□□□ 1.94
RAB40C-212ENST00000569575 AMNQ9BXJ7 453 aa27.14■■□□□ 1.94
RAB40C-212ENST00000569575 TEX13BQ9BXU2 312 aa27.14■■□□□ 1.94
RAB40C-212ENST00000569575 A0A0G2JMZ2 1700 aa27.13■■□□□ 1.93
RAB40C-212ENST00000569575 CYP2C8P10632 490 aa27.13■■□□□ 1.93
RAB40C-212ENST00000569575 CDC37Q16543 378 aaPredicted RBP27.13■■□□□ 1.93
RAB40C-212ENST00000569575 FAM110CQ1W6H9 321 aa27.13■■□□□ 1.93
RAB40C-212ENST00000569575 NSUN7Q8NE18 718 aaKnown RBP27.13■■□□□ 1.93
RAB40C-212ENST00000569575 REPS2Q8NFH8 660 aa27.13■■□□□ 1.93
RAB40C-212ENST00000569575 SMARCC2Q8TAQ2 1214 aa27.13■■□□□ 1.93
RAB40C-212ENST00000569575 BEGAINQ9BUH8 593 aa27.13■■□□□ 1.93
RAB40C-212ENST00000569575 VAT1LQ9HCJ6 419 aa27.13■■□□□ 1.93
RAB40C-212ENST00000569575 V9GY48 417 aaPredicted RBP27.13■■□□□ 1.93
RAB40C-212ENST00000569575 SLC25A27O95847 323 aa27.12■■□□□ 1.93
RAB40C-212ENST00000569575 PDIA4P13667 645 aaKnown RBP27.12■■□□□ 1.93
RAB40C-212ENST00000569575 SAMD3Q8N6K7 520 aa27.12■■□□□ 1.93
RAB40C-212ENST00000569575 SHCBP1Q8NEM2 672 aa27.12■■□□□ 1.93
RAB40C-212ENST00000569575 GPRC5AQ8NFJ5 357 aa27.12■■□□□ 1.93
RAB40C-212ENST00000569575 RBPJLQ9UBG7 517 aa27.12■■□□□ 1.93
RAB40C-212ENST00000569575 ADGRA2Q96PE1 1338 aa27.12■■□□□ 1.93
RAB40C-212ENST00000569575 XBP1P17861 261 aa27.11■■□□□ 1.93
RAB40C-212ENST00000569575 STAT3P40763 770 aa27.11■■□□□ 1.93
RAB40C-212ENST00000569575 PFKFB3Q16875 520 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-212ENST00000569575 QRICH1Q2TAL8 776 aa27.11■■□□□ 1.93
RAB40C-212ENST00000569575 FBXO11Q86XK2 927 aa27.11■■□□□ 1.93
RAB40C-212ENST00000569575 CCDC82Q8N4S0 544 aa27.11■■□□□ 1.93
RAB40C-212ENST00000569575 CCDC12Q8WUD4 166 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-212ENST00000569575 PIGSQ96S52 555 aa27.11■■□□□ 1.93
RAB40C-212ENST00000569575 SH3GLB2Q9NR46 395 aa27.11■■□□□ 1.93
RAB40C-212ENST00000569575 TSHZ2Q9NRE2 1034 aa27.11■■□□□ 1.93
RAB40C-212ENST00000569575 ZNF214Q9UL59 606 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-212ENST00000569575 BAZ2BQ9UIF8 2168 aaKnown RBP27.1■■□□□ 1.93
RAB40C-212ENST00000569575 CTDNEP1O95476 244 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 SLC35G1Q2M3R5 365 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 C17orf99Q6UX52 265 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 RIOX2Q8IUF8 465 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 CMTR1Q8N1G2 835 aaKnown RBP27.1■■□□□ 1.93
RAB40C-212ENST00000569575 SLC26A6Q9BXS9 759 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 GLT8D2Q9H1C3 349 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 CPVLQ9H3G5 476 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 RNF186Q9NXI6 227 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 FBXO40Q9UH90 709 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 MYH6P13533 1939 aa27.1■■□□□ 1.93
RAB40C-212ENST00000569575 PTPDC1A2A3K4 754 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 BCRP11274 1271 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 SCG2P13521 617 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 ERVK-9P63128 1117 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 ERVK-24P63145 666 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 ST3GAL1Q11201 340 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 CRHR2Q13324 411 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 TMEM132BQ14DG7 1078 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 PPP1R18Q6NYC8 613 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 CHST13Q8NET6 341 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 SPATC1LQ9H0A9 340 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 MROH8Q9H579 483 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 MAP3K20Q9NYL2 800 aaKnown RBP27.09■■□□□ 1.93
RAB40C-212ENST00000569575 ORC3Q9UBD5 711 aaPredicted RBP27.09■■□□□ 1.93
RAB40C-212ENST00000569575 ZNF536O15090 1300 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 ABCB11O95342 1321 aa27.09■■□□□ 1.93
RAB40C-212ENST00000569575 HSP90AA1P07900 732 aaKnown RBP27.08■■□□□ 1.93
RAB40C-212ENST00000569575 SAMD1Q6SPF0 538 aaPredicted RBP27.08■■□□□ 1.93
RAB40C-212ENST00000569575 HOMER1Q86YM7 354 aa27.08■■□□□ 1.93
RAB40C-212ENST00000569575 PHKBQ93100 1093 aa27.08■■□□□ 1.93
RAB40C-212ENST00000569575 SMC3Q9UQE7 1217 aa27.08■■□□□ 1.93
RAB40C-212ENST00000569575 MRPL11Q9Y3B7 192 aaKnown RBP27.08■■□□□ 1.93
RAB40C-212ENST00000569575 RBM19Q9Y4C8 960 aaKnown RBP27.08■■□□□ 1.93
RAB40C-212ENST00000569575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.07■■□□□ 1.927e-7■■■□□ 16.7
RAB40C-212ENST00000569575 BARHL2Q9NY43 387 aa27.07■■□□□ 1.92
RAB40C-212ENST00000569575 BTBD7Q9P203 1132 aa27.07■■□□□ 1.92
RAB40C-212ENST00000569575 CCPG1Q9ULG6 757 aa27.07■■□□□ 1.92
RAB40C-212ENST00000569575 PCDHA1Q9Y5I3 950 aa27.07■■□□□ 1.92
RAB40C-212ENST00000569575 COL11A1P12107 1806 aaPredicted RBP27.06■■□□□ 1.92
RAB40C-212ENST00000569575 CNMDO75829 334 aa27.06■■□□□ 1.92
RAB40C-212ENST00000569575 PKN1Q16512 942 aa27.06■■□□□ 1.92
RAB40C-212ENST00000569575 MCF2L2Q86YR7 1114 aa27.06■■□□□ 1.92
RAB40C-212ENST00000569575 CPXCR1Q8N123 301 aa27.06■■□□□ 1.92
RAB40C-212ENST00000569575 JMYQ8N9B5 988 aa27.06■■□□□ 1.92
RAB40C-212ENST00000569575 FAM184AQ8NB25 1140 aa27.06■■□□□ 1.92
RAB40C-212ENST00000569575 CCDC148Q8NFR7 591 aa27.06■■□□□ 1.92
RAB40C-212ENST00000569575 PAGR1Q9BTK6 254 aa27.06■■□□□ 1.92
RAB40C-212ENST00000569575 RAVER2Q9HCJ3 691 aaKnown RBP27.06■■□□□ 1.92
RAB40C-212ENST00000569575 PDCP20941 246 aa27.05■■□□□ 1.92
RAB40C-212ENST00000569575 MAPK4P31152 587 aa27.05■■□□□ 1.92
RAB40C-212ENST00000569575 SNRNP48Q6IEG0 339 aaKnown RBP27.05■■□□□ 1.92
RAB40C-212ENST00000569575 GALNT17Q6IS24 598 aa27.05■■□□□ 1.92
RAB40C-212ENST00000569575 CCDC174Q6PII3 467 aa27.05■■□□□ 1.92
RAB40C-212ENST00000569575 POTEEQ6S8J3 1075 aa27.05■■□□□ 1.92
RAB40C-212ENST00000569575 ANKRD13CQ8N6S4 541 aa27.05■■□□□ 1.92
RAB40C-212ENST00000569575 WBP1LQ9NX94 342 aa27.05■■□□□ 1.92
RAB40C-212ENST00000569575 ESYT2A0FGR8 921 aa27.04■■□□□ 1.92
RAB40C-212ENST00000569575 STRNO43815 780 aa27.04■■□□□ 1.92
RAB40C-212ENST00000569575 TRPA1O75762 1119 aa27.04■■□□□ 1.92
RAB40C-212ENST00000569575 PLS1Q14651 629 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms