RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ARAP2Q8WZ64 1704 aa9.87□□□□□ -0.83
LINC00558-201ENST00000569422 G3V3G9 751 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 MPHOSPH10O00566 681 aaKnown RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 GTPBP6O43824 516 aaPredicted RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 TRIM37O94972 964 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 GYS1P13807 737 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 GNAQP50148 359 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 UBXN1Q04323 297 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 TEX35Q5T0J7 233 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 DCAF8Q5TAQ9 597 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 ACRBPQ8NEB7 543 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 ZNF397Q8NF99 534 aaPredicted RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 GJD4Q96KN9 370 aaPredicted RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 DISC1Q9NRI5 854 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 ZHX1Q9UKY1 873 aaPredicted RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 MYH13Q9UKX3 1938 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 FLT1P17948 1338 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 KCNJ18B7U540 433 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 RNF225M0QZC1 329 aaPredicted RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 STXBP3O00186 592 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 TXKP42681 527 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 TRAPPC10P48553 1259 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 PMS1P54277 932 aaKnown RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 KCNJ12Q14500 433 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 APTXQ7Z2E3 356 aaKnown RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 C4orf32Q8N8J7 132 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 RBM17Q96I25 401 aaKnown RBP9.86□□□□□ -0.83
LINC00558-201ENST00000569422 BARHL2Q9NY43 387 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 CHD4Q14839 1912 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 BCORQ6W2J9 1755 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 ECM29Q5VYK3 1845 aa9.86□□□□□ -0.83
LINC00558-201ENST00000569422 MYO1BO43795 1136 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 ABL1P00519 1130 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 LONP1P36776 959 aaKnown RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 FNBP4Q8N3X1 1017 aaPredicted RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 CCDC148Q8NFR7 591 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 GJA10Q969M2 543 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 TRIM47Q96LD4 638 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 IRS2Q9Y4H2 1338 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 TFRCP02786 760 aaKnown RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 GYPCP04921 128 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 TPM1P09493 284 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 TXNRD1Q16881 649 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 ANKRD20A12PQ8NF67 263 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 TBC1D16Q8TBP0 767 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 TBCKQ8TEA7 893 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 RRP36Q96EU6 259 aaKnown RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 PCMTD1Q96MG8 357 aaPredicted RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 SRRTQ9BXP5 876 aaKnown RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 L2HGDHQ9H9P8 463 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 ST7Q9NRC1 585 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 KCND1Q9NSA2 647 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 PUF60Q9UHX1 559 aaKnown RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 PARP3Q9Y6F1 533 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 CCDC175P0C221 793 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 PLCG1P19174 1290 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 SLC16A2P36021 539 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 COPB1P53618 953 aaKnown RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 CACNB3P54284 484 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 NAALADL2Q58DX5 795 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 ZNF658Q5TYW1 1059 aaPredicted RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 CDKAL1Q5VV42 579 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 DPP8Q6V1X1 898 aaPredicted RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 CTAGE1Q96RT6 745 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 ZNF287Q9HBT7 754 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 TCP11L1Q9NUJ3 509 aa9.85□□□□□ -0.83
LINC00558-201ENST00000569422 COL22A1Q8NFW1 1626 aaPredicted RBP9.85□□□□□ -0.83
LINC00558-201ENST00000569422 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
LINC00558-201ENST00000569422 FAM196BA6NMK8 535 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 SEC31AO94979 1220 aaKnown RBP9.84□□□□□ -0.83
LINC00558-201ENST00000569422 ATP2B4P23634 1241 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 KCNJ6P48051 423 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 SYCP1Q15431 976 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 CCDC93Q567U6 631 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 ZNF569Q5MCW4 686 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 CABP7Q86V35 215 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 LRRC15Q8TF66 581 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 TFR2Q9UP52 801 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 PDS5AQ29RF7 1337 aaKnown RBP9.84□□□□□ -0.83
LINC00558-201ENST00000569422 MFAP3LO75121 409 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 KRT9P35527 623 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 PPP4CP60510 307 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 ASIC1P78348 528 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 NONOQ15233 471 aaKnown RBP eCLIP9.84□□□□□ -0.83
LINC00558-201ENST00000569422 TCP11X2Q5H9J9 407 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 ARL6IP4Q66PJ3 421 aaKnown RBP9.84□□□□□ -0.83
LINC00558-201ENST00000569422 DYMQ7RTS9 669 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 POTEDQ86YR6 584 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 SLF1Q9BQI6 1058 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 C6orf50Q9HD87 102 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 OGFRQ9NZT2 677 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 PHLPP2Q6ZVD8 1323 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 NRAPQ86VF7 1730 aa9.84□□□□□ -0.83
LINC00558-201ENST00000569422 GPR75-ASB3A0A0A6YYF3 556 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 MARCH6O60337 910 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 FCER1AP12319 257 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 AKR1B1P15121 316 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 TNNI2P48788 182 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 RHBDL3P58872 404 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms