RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 ZNF214Q9UL59 606 aaPredicted RBP10.59□□□□□ -0.71
CHD9-219ENST00000569225 TNPO2O14787 897 aaKnown RBP10.58□□□□□ -0.72
CHD9-219ENST00000569225 ICAM1P05362 532 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 HOXD10P28358 340 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 PDIA3P30101 505 aaKnown RBP10.58□□□□□ -0.72
CHD9-219ENST00000569225 PSMC4P43686 418 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 CDC37Q16543 378 aaPredicted RBP10.58□□□□□ -0.72
CHD9-219ENST00000569225 WDR78Q5VTH9 848 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 POTEEQ6S8J3 1075 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 NCAPG2Q86XI2 1143 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 CD99L2Q8TCZ2 262 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 COA7Q96BR5 231 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
CHD9-219ENST00000569225 JMJD4Q9H9V9 463 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 RAVER2Q9HCJ3 691 aaKnown RBP10.58□□□□□ -0.72
CHD9-219ENST00000569225 FBXO40Q9UH90 709 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 CCPG1Q9ULG6 757 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 IVNS1ABPQ9Y6Y0 642 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 NID2Q14112 1375 aa10.58□□□□□ -0.72
CHD9-219ENST00000569225 CPLX1O14810 134 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 Q3C1V9 767 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 PLEKHH3Q7Z736 793 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 CHST13Q8NET6 341 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 SLKQ9H2G2 1235 aaPredicted RBP10.57□□□□□ -0.72
CHD9-219ENST00000569225 CPVLQ9H3G5 476 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 RIOX1Q9H6W3 641 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 EFCC1Q9HA90 598 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
CHD9-219ENST00000569225 LIMCH1Q9UPQ0 1083 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 HPS5Q9UPZ3 1129 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 ZBTB5O15062 677 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 STRNO43815 780 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 PEX10O60683 326 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 CDKL5O76039 1030 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 PLEKHA8P1O95397 391 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 ERCC3P19447 782 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 SLC4A3P48751 1232 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 MCM2P49736 904 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 PRMT2P55345 433 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 SNAP25P60880 206 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 FBXO11Q86XK2 927 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 HOMER1Q86YM7 354 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 SRBD1Q8N5C6 995 aaKnown RBP10.57□□□□□ -0.72
CHD9-219ENST00000569225 TRIM47Q96LD4 638 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 AMNQ9BXJ7 453 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 PORCNQ9H237 461 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
CHD9-219ENST00000569225 ZNF536O15090 1300 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 PNMA6FA0A0J9YX94 578 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 PFKFB2O60825 505 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 ALAS1P13196 640 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 AKAP17AQ02040 695 aaKnown RBP10.56□□□□□ -0.72
CHD9-219ENST00000569225 KCTD2Q14681 263 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
CHD9-219ENST00000569225 ABRAQ8N0Z2 381 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 SOCS4Q8WXH5 440 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 MTMR8Q96EF0 704 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 ZSCAN31Q96LW9 406 aaPredicted RBP10.56□□□□□ -0.72
CHD9-219ENST00000569225 AGBL1Q96MI9 1066 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 PIGSQ96S52 555 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
CHD9-219ENST00000569225 ACAD9Q9H845 621 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 RNF146Q9NTX7 359 aa10.56□□□□□ -0.72
CHD9-219ENST00000569225 ABCB11O95342 1321 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 SLC15A5A6NIM6 579 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 CYTH3O43739 400 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 FCER1AP12319 257 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 CDC27P30260 824 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 ADD1P35611 737 aaKnown RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 STK3Q13188 491 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 GPR142Q7Z601 462 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 CTU1Q7Z7A3 348 aaKnown RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 NBPF11Q86T75 865 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 TRIM22Q8IYM9 498 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 CCDC82Q8N4S0 544 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 TRERF1Q96PN7 1200 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 ARHGAP39Q9C0H5 1083 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 SH2B1Q9NRF2 756 aaPredicted RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 HOMER2Q9NSB8 354 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 SLC5A4Q9NY91 659 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 MRPL11Q9Y3B7 192 aaKnown RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 TRIM17Q9Y577 477 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 ECM2O94769 699 aaPredicted RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 IFNAR1P17181 557 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 PTPREP23469 700 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 PKN2Q16513 984 aaKnown RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 USH1GQ495M9 461 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 PIBF1Q8WXW3 757 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 MMP19Q99542 508 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 NUDT12Q9BQG2 462 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 MAF1Q9H063 256 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 NCOA5Q9HCD5 579 aaKnown RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 FAM217BQ9NTX9 383 aaPredicted RBP10.55□□□□□ -0.72
CHD9-219ENST00000569225 SRRDQ9UH36 339 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 PCDHA1Q9Y5I3 950 aa10.55□□□□□ -0.72
CHD9-219ENST00000569225 A0A0G2JMZ2 1700 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 PCNTO95613 3336 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms