RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 B2RBV5 119 aa5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 USP2O75604 605 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 ITGA4P13612 1032 aa5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 GALK1P51570 392 aa5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 ZC3H6P61129 1189 aaKnown RBP5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 C6orf15Q6UXA7 325 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 TMEM52Q8NDY8 209 aa5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 SHISA4Q96DD7 197 aa5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 MAP6Q96JE9 813 aa5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 RSF1Q96T23 1441 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 ACTR10Q9NZ32 417 aa5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 WHRNQ9P202 907 aa5.27□□□□□ -1.57
HMGB1P6-201ENST00000569046 CCDC88BA6NC98 1476 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 RAD54L2Q9Y4B4 1467 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 A0A087WZG4 1122 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 FITM1A5D6W6 292 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 PSPNO60542 156 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 GLI1P08151 1106 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 RAC2P15153 192 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 DUSP4Q13115 394 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 PPP2R5DQ14738 602 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 TCEAL1Q15170 157 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 NR0B2Q15466 257 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 TMEM67Q5HYA8 995 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 LARP1BQ659C4 914 aaKnown RBP5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 OXR1Q8N573 874 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 SYTL4Q96C24 671 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 ZDHHC15Q96MV8 337 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 MCMBPQ9BTE3 642 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 CDADC1Q9BWV3 514 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 RNF32Q9H0A6 362 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 ERVK13-1Q9NX77 482 aa5.26□□□□□ -1.57
HMGB1P6-201ENST00000569046 FADS2P1A8MWK0 482 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 VAMP4O75379 141 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 GSTM1P09488 218 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 IFNGR1P15260 489 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 KIR3DS1Q14943 382 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 CWF19L1Q69YN2 538 aaKnown RBP5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 MRM1Q6IN84 353 aaKnown RBP5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 OGFOD2Q6N063 350 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 PRR23BQ6ZRT6 265 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 ADAT2Q7Z6V5 191 aaKnown RBP5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 ARHGEF39Q8N4T4 335 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 ANKS4BQ8N8V4 417 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 HNRNPLLQ8WVV9 542 aaKnown RBP5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 FCRL2Q96LA5 508 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 FCRL3Q96P31 734 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 LGR4Q9BXB1 951 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 KCNK12Q9HB15 430 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 DIS3Q9Y2L1 958 aaKnown RBP5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 TDRD9Q8NDG6 1382 aaKnown RBP5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 DNMBPQ6XZF7 1577 aa5.25□□□□□ -1.57
HMGB1P6-201ENST00000569046 ANKRD34BA5PLL1 514 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 CD3EP07766 207 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 KIR2DL1P43626 348 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 KIR2DL2P43627 348 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 CHRNEQ04844 493 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 TNNI3KQ59H18 835 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 CEP128Q6ZU80 1094 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 ANKS3Q6ZW76 656 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 SPPL2CQ8IUH8 684 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 FAM178BQ8IXR5 827 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 LILRA2Q8N149 483 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 CELF2-AS1Q8N7Q2 184 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 PLCD4Q9BRC7 762 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 GBP3Q9H0R5 595 aa5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 CGGBP1Q9UFW8 167 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 GPR55Q9Y2T6 319 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 SF3B6Q9Y3B4 125 aaKnown RBP5.24□□□□□ -1.57
HMGB1P6-201ENST00000569046 KIF13AQ9H1H9 1805 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 LRRC10BA6NIK2 292 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 FGF10O15520 208 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 KLF4O43474 513 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 NRDCO43847 1150 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 PPM1BO75688 479 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 RTP1P59025 263 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 POU4F1Q01851 419 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 NCAPHQ15003 741 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 MLANAQ16655 118 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 DPY19L1Q2PZI1 675 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 SLCO6A1Q86UG4 719 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 NLRX1Q86UT6 975 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 SIRT2Q8IXJ6 389 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 RCC1LQ96I51 464 aaKnown RBP5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 TNFRSF10DQ9UBN6 386 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 GPR160Q9UJ42 338 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 SUGT1Q9Y2Z0 365 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 SNAPC4Q5SXM2 1469 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 ERCC6L2Q5T890 1561 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 PBRM1Q86U86 1689 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 CLASP1Q7Z460 1538 aa5.23□□□□□ -1.57
HMGB1P6-201ENST00000569046 POLA1P09884 1462 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P6-201ENST00000569046 STXBP3O00186 592 aa5.22□□□□□ -1.57
HMGB1P6-201ENST00000569046 DDAH1O94760 285 aa5.22□□□□□ -1.57
HMGB1P6-201ENST00000569046 GJB6O95452 261 aa5.22□□□□□ -1.57
HMGB1P6-201ENST00000569046 MESP2Q0VG99 397 aa5.22□□□□□ -1.57
HMGB1P6-201ENST00000569046 FXNQ16595 210 aa5.22□□□□□ -1.57
HMGB1P6-201ENST00000569046 HSF5Q4G112 596 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms