RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PSRC1Q6PGN9 363 aaPredicted RBP18.79■□□□□ 0.6
HERPUD1-215ENST00000568676 KIFC2Q96AC6 838 aa18.79■□□□□ 0.6
HERPUD1-215ENST00000568676 TIFAQ96CG3 184 aa18.79■□□□□ 0.6
HERPUD1-215ENST00000568676 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.79■□□□□ 0.64e-17■■□□□ 11.7
HERPUD1-215ENST00000568676 MTMR4Q9NYA4 1195 aa18.79■□□□□ 0.6
HERPUD1-215ENST00000568676 TJAP1Q5JTD0 557 aa18.78■□□□□ 0.6
HERPUD1-215ENST00000568676 GNASQ5JWF2 1037 aa18.78■□□□□ 0.6
HERPUD1-215ENST00000568676 CCDC129Q6ZRS4 1044 aa18.78■□□□□ 0.6
HERPUD1-215ENST00000568676 ARMCX2Q7L311 632 aa18.78■□□□□ 0.6
HERPUD1-215ENST00000568676 VTI1AQ96AJ9 217 aa18.78■□□□□ 0.6
HERPUD1-215ENST00000568676 MTIF3Q9H2K0 278 aaKnown RBP18.78■□□□□ 0.6
HERPUD1-215ENST00000568676 RAVER2Q9HCJ3 691 aaKnown RBP18.78■□□□□ 0.6
HERPUD1-215ENST00000568676 PRDM6Q9NQX0 595 aa18.78■□□□□ 0.6
HERPUD1-215ENST00000568676 RNF113AO15541 343 aaKnown RBP18.77■□□□□ 0.6
HERPUD1-215ENST00000568676 CABYRO75952 493 aa18.77■□□□□ 0.6
HERPUD1-215ENST00000568676 TDO2P48775 406 aa18.77■□□□□ 0.6
HERPUD1-215ENST00000568676 TMEM240Q5SV17 173 aa18.77■□□□□ 0.6
HERPUD1-215ENST00000568676 RASIP1Q5U651 963 aa18.77■□□□□ 0.6
HERPUD1-215ENST00000568676 CEP95Q96GE4 821 aa18.77■□□□□ 0.6
HERPUD1-215ENST00000568676 GAS2L1Q99501 681 aaPredicted RBP18.77■□□□□ 0.6
HERPUD1-215ENST00000568676 PLIN4Q96Q06 1357 aa18.77■□□□□ 0.6
HERPUD1-215ENST00000568676 MYADML2A6NDP7 307 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 GPAA1O43292 621 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 SLC3A2P08195 630 aaKnown RBP18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 BMP3P12645 472 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 SLC4A3P48751 1232 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 PDE4BQ07343 736 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 TKFCQ3LXA3 575 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 FAM160B2Q86V87 743 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 FAM126BQ8IXS8 530 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 CHURC1Q8WUH1 139 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 OSBP2Q969R2 916 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 NACAP1Q9BZK3 213 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 ACAD9Q9H845 621 aa18.76■□□□□ 0.59
HERPUD1-215ENST00000568676 ASB14A6NK59 587 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 TSPY3P0CV98 308 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 TSPY8P0CW00 308 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 STAT2P52630 851 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 RAB30Q15771 203 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 AKNAD1Q5T1N1 836 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 CCDC144CPQ8IYA2 1237 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 NEDD1Q8NHV4 660 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 FGD4Q96M96 766 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 KATNBL1Q9H079 304 aa18.75■□□□□ 0.59
HERPUD1-215ENST00000568676 SPTBN5Q9NRC6 3674 aaKnown RBP18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 PATL2C9JE40 543 aaKnown RBP18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 ADCY6O43306 1168 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 PLA2G6O60733 806 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 APPP05067 770 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 CSF2RAP15509 400 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 TNFAIP2Q03169 654 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 SLFN13Q68D06 897 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 C16orf59Q7L2K0 433 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 FAM133AQ8N9E0 248 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 PBX4Q9BYU1 374 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 EPB41L4AQ9HCS5 686 aaPredicted RBP18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 MYH4Q9Y623 1939 aa18.74■□□□□ 0.59
HERPUD1-215ENST00000568676 ZEB2O60315 1214 aa18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 CD4P01730 458 aa18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 IFNL3Q8IZI9 196 aa18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 SLC43A3Q8NBI5 491 aa18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 ATXN2LQ8WWM7 1075 aaKnown RBP18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 HERVK_113Q902F9 699 aa18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 IL23AQ9NPF7 189 aa18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 MSRAQ9UJ68 235 aa18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 Q9Y3F1 56 aa18.73■□□□□ 0.59
HERPUD1-215ENST00000568676 TMEM232C9JQI7 657 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 CTAGE5O15320 804 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 SMARCA5O60264 1052 aaPredicted RBP18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 PRDM1O75626 825 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 ZNF365Q70YC5 407 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 MIER1Q8N108 512 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 LRRC47Q8N1G4 583 aaKnown RBP18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 STAG1Q8WVM7 1258 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 PPP1R12CQ9BZL4 782 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 RCAN3Q9UKA8 241 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 PRUNE2Q8WUY3 3088 aa18.72■□□□□ 0.59
HERPUD1-215ENST00000568676 SLC1A4P43007 532 aa18.71■□□□□ 0.59
HERPUD1-215ENST00000568676 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
HERPUD1-215ENST00000568676 AP5M1Q9H0R1 490 aa18.71■□□□□ 0.59
HERPUD1-215ENST00000568676 DCTPP1Q9H773 170 aa18.71■□□□□ 0.59
HERPUD1-215ENST00000568676 A1CFQ9NQ94 594 aaKnown RBP18.71■□□□□ 0.59
HERPUD1-215ENST00000568676 HOMER2Q9NSB8 354 aa18.71■□□□□ 0.59
HERPUD1-215ENST00000568676 RNF146Q9NTX7 359 aa18.71■□□□□ 0.59
HERPUD1-215ENST00000568676 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
HERPUD1-215ENST00000568676 TNFRSF10AO00220 468 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 FGBP02675 491 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 CNTN2Q02246 1040 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 IKQ13123 557 aaPredicted RBP18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 FSCN1Q16658 493 aaKnown RBP18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 IQSEC1Q6DN90 963 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 TLK2Q86UE8 772 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 USP38Q8NB14 1042 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 NAPBQ9H115 298 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 HIPK3Q9H422 1215 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 TTC41PQ6P2S7 1318 aa18.7■□□□□ 0.58
HERPUD1-215ENST00000568676 M0R2C6 588 aa18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 ERC2O15083 957 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms