RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 MIPEPQ99797 713 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 PRDM5Q9NQX1 630 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-217ENST00000567817 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 TJP2Q9UDY2 1190 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 SLC5A6Q9Y289 635 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 U3KQE9 123 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 SPATA31A5Q5VU36 1347 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 SPATA31A7Q8IWB4 1347 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 EIF3AQ14152 1382 aaKnown RBP6.92□□□□□ -1.3
CAPN3-217ENST00000567817 COL14A1Q05707 1796 aaKnown RBP6.92□□□□□ -1.3
CAPN3-217ENST00000567817 TECPR2O15040 1411 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 TRPM1Q7Z4N2 1603 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 ABCA3Q99758 1704 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 TMEM265A0A087WTH1 108 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 MINDY4BA8MYZ0 360 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 GARTP22102 1010 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 ZNF746Q6NUN9 644 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-217ENST00000567817 GOLM1Q8NBJ4 401 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 TMEM87AQ8NBN3 555 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 AGBL5Q8NDL9 886 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 TMEM87BQ96K49 555 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 TNKS2Q9H2K2 1166 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 COPRSQ9NQ92 184 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 GGT7Q9UJ14 662 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 VAV3Q9UKW4 847 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 RNF123Q5XPI4 1314 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 RPGRIP1LQ68CZ1 1315 aa6.91□□□□□ -1.3
CAPN3-217ENST00000567817 GNAT3A8MTJ3 354 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 ITIH2P19823 946 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 PRKCQQ04759 706 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 LETMD1Q6P1Q0 360 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 C22orf34Q6ZV56 151 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 KRT28Q7Z3Y7 464 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 REC114Q7Z4M0 266 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 MCATQ8IVS2 390 aaKnown RBP6.9□□□□□ -1.3
CAPN3-217ENST00000567817 TP53INP2Q8IXH6 220 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 ACSF2Q96CM8 615 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-217ENST00000567817 COX4I2Q96KJ9 171 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 HRASLS5Q96KN8 279 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 TPX2Q9ULW0 747 aaKnown RBP6.9□□□□□ -1.3
CAPN3-217ENST00000567817 PLAGL2Q9UPG8 496 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 SNX11Q9Y5W9 270 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 PRR36Q9H6K5 1346 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 FANCIQ9NVI1 1328 aa6.9□□□□□ -1.3
CAPN3-217ENST00000567817 MAP3K5Q99683 1374 aa6.9□□□□□ -1.31
CAPN3-217ENST00000567817 DLC1Q96QB1 1528 aa6.9□□□□□ -1.31
CAPN3-217ENST00000567817 FAM83GA6ND36 823 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 PLCG1P19174 1290 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 VAMP1P23763 118 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
CAPN3-217ENST00000567817 IRAK1P51617 712 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 CCDC184Q52MB2 194 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 TMEM201Q5SNT2 666 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 POLR3GLQ9BT43 218 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 LRRC3Q9BY71 257 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 PAK6Q9NQU5 681 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-217ENST00000567817 METTL5Q9NRN9 209 aaKnown RBP6.89□□□□□ -1.31
CAPN3-217ENST00000567817 BTG4Q9NY30 223 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 CORINQ9Y5Q5 1042 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 NRXN1Q9ULB1 1477 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 CAMTA1Q9Y6Y1 1673 aa6.89□□□□□ -1.31
CAPN3-217ENST00000567817 FMN2Q9NZ56 1722 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 NRKQ7Z2Y5 1582 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 NPC1L1Q9UHC9 1359 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 ZNF865P0CJ78 1059 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-217ENST00000567817 CLCN7P51798 805 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 CWF19L2Q2TBE0 894 aaKnown RBP6.88□□□□□ -1.31
CAPN3-217ENST00000567817 SFRP5Q5T4F7 317 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 FBXL19Q6PCT2 694 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 WFDC3Q8IUB2 231 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 ABI1Q8IZP0 508 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 XAGE3Q8WTP9 111 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 TESK2Q96S53 571 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 DPH2Q9BQC3 489 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-217ENST00000567817 BACH2Q9BYV9 841 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 CEP350Q5VT06 3117 aa6.88□□□□□ -1.31
CAPN3-217ENST00000567817 KIF1BO60333 1816 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 CASZ1Q86V15 1759 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 SPATA31A1Q5TZJ5 1347 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 GREM1O60565 184 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 CYP7A1P22680 504 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 ZNF76P36508 570 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 YARSP54577 528 aaKnown RBP6.87□□□□□ -1.31
CAPN3-217ENST00000567817 NKPD1Q17RQ9 610 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 MCTP1Q6DN14 999 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 ZNF574Q6ZN55 896 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-217ENST00000567817 FAM13CQ8NE31 585 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 ANP32EQ9BTT0 268 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 REV1Q9UBZ9 1251 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 ADGRE2Q9UHX3 823 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 POLR3KQ9Y2Y1 108 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-217ENST00000567817 KNDC1Q76NI1 1749 aa6.87□□□□□ -1.31
CAPN3-217ENST00000567817 ANKARQ7Z5J8 1434 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 ABCC11Q96J66 1382 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 PLSCR1O15162 318 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 HTR3BO95264 441 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 ETV3P41162 512 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 BNIP3Q12983 259 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms