RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 HERVK_113P62684 666 aa17.14■□□□□ 0.33
SPG7-213ENST00000566221 AKAP17AQ02040 695 aaKnown RBP17.14■□□□□ 0.33
SPG7-213ENST00000566221 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
SPG7-213ENST00000566221 MB21D1Q8N884 522 aa17.14■□□□□ 0.33
SPG7-213ENST00000566221 PHKBQ93100 1093 aa17.14■□□□□ 0.33
SPG7-213ENST00000566221 ATG4CQ96DT6 458 aa17.14■□□□□ 0.33
SPG7-213ENST00000566221 MTMR8Q96EF0 704 aa17.14■□□□□ 0.33
SPG7-213ENST00000566221 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
SPG7-213ENST00000566221 JMJD4Q9H9V9 463 aa17.14■□□□□ 0.33
SPG7-213ENST00000566221 ADAMTS5Q9UNA0 930 aa17.14■□□□□ 0.33
SPG7-213ENST00000566221 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 VWA5AO00534 786 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 ZBED4O75132 1171 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 ALDH1A1P00352 501 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 HMGN5P82970 282 aaKnown RBP17.13■□□□□ 0.33
SPG7-213ENST00000566221 TAF1CQ15572 869 aaPredicted RBP17.13■□□□□ 0.33
SPG7-213ENST00000566221 CDC37Q16543 378 aaPredicted RBP17.13■□□□□ 0.33
SPG7-213ENST00000566221 HOMER1Q86YM7 354 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
SPG7-213ENST00000566221 INTS4Q96HW7 963 aaKnown RBP17.13■□□□□ 0.33
SPG7-213ENST00000566221 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
SPG7-213ENST00000566221 SLC26A6Q9BXS9 759 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 SLC38A10Q9HBR0 1119 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 CTDP1Q9Y5B0 961 aaPredicted RBP17.13■□□□□ 0.33
SPG7-213ENST00000566221 MGAMO43451 1857 aa17.13■□□□□ 0.33
SPG7-213ENST00000566221 ZBTB5O15062 677 aa17.12■□□□□ 0.33
SPG7-213ENST00000566221 PRPF3O43395 683 aaKnown RBP17.12■□□□□ 0.33
SPG7-213ENST00000566221 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
SPG7-213ENST00000566221 SMARCC2Q8TAQ2 1214 aa17.12■□□□□ 0.33
SPG7-213ENST00000566221 PIGSQ96S52 555 aa17.12■□□□□ 0.33
SPG7-213ENST00000566221 PNMA2Q9UL42 364 aa17.12■□□□□ 0.33
SPG7-213ENST00000566221 PLXNB2O15031 1838 aa17.12■□□□□ 0.33
SPG7-213ENST00000566221 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 hCG_1984214I3L0E3 225 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 JAK2O60674 1132 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 DEXIO95424 95 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 CYP2C8P10632 490 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 GCLCP48506 637 aaPredicted RBP17.11■□□□□ 0.33
SPG7-213ENST00000566221 OAZ1P54368 228 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 TRAF1Q13077 416 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 ZNF713Q8N859 430 aaPredicted RBP17.11■□□□□ 0.33
SPG7-213ENST00000566221 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 WASF1Q92558 559 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
SPG7-213ENST00000566221 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
SPG7-213ENST00000566221 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
SPG7-213ENST00000566221 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 ICAM1P05362 532 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 PFKFB3Q16875 520 aaPredicted RBP17.1■□□□□ 0.33
SPG7-213ENST00000566221 CCDC174Q6PII3 467 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 FBXO11Q86XK2 927 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 REPS2Q8NFH8 660 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 ZFYVE28Q9HCC9 887 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 RABGAP1Q9Y3P9 1069 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 ADGRA2Q96PE1 1338 aa17.1■□□□□ 0.33
SPG7-213ENST00000566221 ZNFX1Q9P2E3 1918 aaKnown RBP17.09■□□□□ 0.33
SPG7-213ENST00000566221 PDE4DIPQ5VU43 2346 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 hCG_1642624A0A1W2PR95 340 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 SCG2P13521 617 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 SNAP25P60880 206 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 PKN1Q16512 942 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 DDX11Q96FC9 970 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 PAGR1Q9BTK6 254 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 AMNQ9BXJ7 453 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 TSKSQ9UJT2 592 aa17.09■□□□□ 0.33
SPG7-213ENST00000566221 ZNF214Q9UL59 606 aaPredicted RBP17.09■□□□□ 0.33
SPG7-213ENST00000566221 ZNF536O15090 1300 aa17.08■□□□□ 0.32
SPG7-213ENST00000566221 CA12O43570 354 aa17.08■□□□□ 0.32
SPG7-213ENST00000566221 GJB2P29033 226 aa17.08■□□□□ 0.32
SPG7-213ENST00000566221 TMEM132BQ14DG7 1078 aa17.08■□□□□ 0.32
SPG7-213ENST00000566221 HEATR3Q7Z4Q2 680 aa17.08■□□□□ 0.32
SPG7-213ENST00000566221 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.32
SPG7-213ENST00000566221 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.32
SPG7-213ENST00000566221 RAVER2Q9HCJ3 691 aaKnown RBP17.08■□□□□ 0.32
SPG7-213ENST00000566221 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.32
SPG7-213ENST00000566221 ABCB11O95342 1321 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 TLR2O60603 784 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 PPP1R11O60927 126 aaPredicted RBP17.07■□□□□ 0.32
SPG7-213ENST00000566221 CNMDO75829 334 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 FDPSP14324 419 aaKnown RBP17.07■□□□□ 0.32
SPG7-213ENST00000566221 CRHR2Q13324 411 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 PLS1Q14651 629 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 FAM110CQ1W6H9 321 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 USH1GQ495M9 461 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 WWC2Q6AWC2 1192 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 SNRNP48Q6IEG0 339 aaKnown RBP17.07■□□□□ 0.32
SPG7-213ENST00000566221 PPP1R18Q6NYC8 613 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 POTEEQ6S8J3 1075 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
SPG7-213ENST00000566221 GPKOWQ92917 476 aaPredicted RBP eCLIP17.07■□□□□ 0.32
SPG7-213ENST00000566221 CFHR5Q9BXR6 569 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 SPATC1LQ9H0A9 340 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 BARHL2Q9NY43 387 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 BTBD7Q9P203 1132 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 RBPJLQ9UBG7 517 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms