RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MDM2Q00987 491 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 CKAP4Q07065 602 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 IMMTQ16891 758 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 AZIN2Q96A70 460 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 HVCN1Q96D96 273 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TSGA10Q9BZW7 698 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TMBIM4Q9HC24 238 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 UTP6Q9NYH9 597 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 PCDHGC5Q9Y5F6 944 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 CASP14P31944 242 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TUBP50607 506 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 SPDL1Q96EA4 605 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ATP6V1G3Q96LB4 118 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 RNPC3Q96LT9 517 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 CDCA7Q9BWT1 371 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 GDF3Q9NR23 364 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 CTNNAL1Q9UBT7 734 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 USTQ9Y2C2 406 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 UBN2Q6ZU65 1347 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 WFS1O76024 890 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 LBRQ14739 615 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 NUGGCQ68CJ6 796 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 NCAPH2Q6IBW4 605 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 SHC4Q6S5L8 630 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TRIM42Q8IWZ5 723 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 CCDC148Q8NFR7 591 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TEKT4Q8WW24 435 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 DNAAF2Q9NVR5 837 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 HMG20BQ9P0W2 317 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 CTAGE9A4FU28 777 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TMEM110-MUSTN1A8MSY1 372 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 FAM107AO95990 144 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ADKP55263 362 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 THEMIS2Q5TEJ8 643 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 OLFM4Q6UX06 510 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 HDGFL2Q7Z4V5 671 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 ZNF274Q96GC6 653 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 FAM167BQ9BTA0 163 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 DDX21Q9NR30 783 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD9-218ENST00000566029 POLR3EQ9NVU0 708 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ZCCHC11Q5TAX3 1644 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 A0A0D9SFI3 127 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 DMPKQ09013 629 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 SPECC1Q5M775 1068 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 AGBL2Q5U5Z8 902 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 NCSTNQ92542 709 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 CHCHD3Q9NX63 227 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 XBP1P17861 261 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 GUCY1A3Q02108 690 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 FAM69CQ0P6D2 419 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 NR1I3Q14994 352 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 EPHA10Q5JZY3 1008 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 RESP18Q5W5W9 173 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ANO1Q5XXA6 986 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 BTN2A1Q7KYR7 527 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 GORASP1Q9BQQ3 440 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 MAN1B1Q9UKM7 699 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 HMOX1P09601 288 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 DPYDQ12882 1025 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 PNOCQ13519 176 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ANO7Q6IWH7 933 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 SLF2Q8IX21 1173 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 NBPF15Q8N660 670 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 MMADHCQ9H3L0 296 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 KDM4CQ9H3R0 1056 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ZFYVE1Q9HBF4 777 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 PCP4L1A6NKN8 68 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ATP1A1P05023 1023 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 ATP4AP20648 1035 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 RXRBP28702 533 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 EPHB4P54760 987 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 EXOSC10Q01780 885 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 DPY19L2Q6NUT2 758 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 GBP7Q8N8V2 638 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 EHBP1Q8NDI1 1231 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 SMCR8Q8TEV9 937 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 DDX17Q92841 729 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 DNAJC7Q99615 494 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 HAUS4Q9H6D7 363 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 SEC31BQ9NQW1 1179 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 CLIC4Q9Y696 253 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ATP7AQ04656 1500 aa3.21□□□□□ -1.89
CHD9-218ENST00000566029 H0YGN5 161 aa3.21□□□□□ -1.89
CHD9-218ENST00000566029 CDC25AP30304 524 aa3.21□□□□□ -1.89
CHD9-218ENST00000566029 CTCFP49711 727 aaPredicted RBP3.21□□□□□ -1.89
CHD9-218ENST00000566029 CFAP61Q8NHU2 1237 aa3.21□□□□□ -1.89
CHD9-218ENST00000566029 SERTAD1Q9UHV2 236 aa3.21□□□□□ -1.89
CHD9-218ENST00000566029 EVLQ9UI08 416 aaPredicted RBP3.21□□□□□ -1.89
CHD9-218ENST00000566029 NFS1Q9Y697 457 aa3.21□□□□□ -1.89
CHD9-218ENST00000566029 CCT8L1PA6NM43 557 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 LUC7L3O95232 432 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 MYBP10242 640 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 ZNF827Q17R98 1081 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 Q4G0T1 1027 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 KIAA1210Q9ULL0 1709 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 ITIH6Q6UXX5 1313 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 CFAP73A6NFT4 308 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 SEMA3EO15041 775 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 FOXN1O15353 648 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 ECEL1O95672 775 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms