RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 KRTAP9-8Q9BYQ0 159 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 MRVI1Q9Y6F6 885 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 PLCG1P19174 1290 aa6.94□□□□□ -1.3
CHD9-215ENST00000565442 RPL10P27635 214 aaKnown RBP6.94□□□□□ -1.3
CHD9-215ENST00000565442 KIR2DL1P43626 348 aaPredicted RBP6.94□□□□□ -1.3
CHD9-215ENST00000565442 KIR2DL2P43627 348 aaPredicted RBP6.94□□□□□ -1.3
CHD9-215ENST00000565442 COL9A2Q14055 689 aaPredicted RBP6.94□□□□□ -1.3
CHD9-215ENST00000565442 SLC14A2Q15849 920 aa6.94□□□□□ -1.3
CHD9-215ENST00000565442 LINC01356Q8N9X3 169 aa6.94□□□□□ -1.3
CHD9-215ENST00000565442 MAP6Q96JE9 813 aa6.94□□□□□ -1.3
CHD9-215ENST00000565442 FERD3LQ96RJ6 166 aa6.94□□□□□ -1.3
CHD9-215ENST00000565442 BDH2Q9BUT1 245 aa6.94□□□□□ -1.3
CHD9-215ENST00000565442 ZMYM5Q9UJ78 669 aa6.94□□□□□ -1.3
CHD9-215ENST00000565442 ABLIM1O14639 778 aa6.93□□□□□ -1.3
CHD9-215ENST00000565442 PNLIPP16233 465 aa6.93□□□□□ -1.3
CHD9-215ENST00000565442 SDHBP21912 280 aa6.93□□□□□ -1.3
CHD9-215ENST00000565442 RNF111Q6ZNA4 994 aa6.93□□□□□ -1.3
CHD9-215ENST00000565442 CEP128Q6ZU80 1094 aa6.93□□□□□ -1.3
CHD9-215ENST00000565442 WAPLQ7Z5K2 1190 aa6.93□□□□□ -1.3
CHD9-215ENST00000565442 REXO1Q8N1G1 1221 aaKnown RBP6.93□□□□□ -1.3
CHD9-215ENST00000565442 UBXN4Q92575 508 aa6.93□□□□□ -1.3
CHD9-215ENST00000565442 ANAPC16Q96DE5 110 aa6.93□□□□□ -1.3
CHD9-215ENST00000565442 SRRTQ9BXP5 876 aaKnown RBP6.93□□□□□ -1.3
CHD9-215ENST00000565442 HTR3BO95264 441 aa6.92□□□□□ -1.3
CHD9-215ENST00000565442 INSRRP14616 1297 aa6.92□□□□□ -1.3
CHD9-215ENST00000565442 TMEM201Q5SNT2 666 aa6.92□□□□□ -1.3
CHD9-215ENST00000565442 SLFN12Q8IYM2 578 aa6.92□□□□□ -1.3
CHD9-215ENST00000565442 DNAJC2Q99543 621 aaKnown RBP6.92□□□□□ -1.3
CHD9-215ENST00000565442 STK10O94804 968 aaKnown RBP6.91□□□□□ -1.3
CHD9-215ENST00000565442 ETFBP38117 255 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 ERVFRD-1P60508 538 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 PUM1Q14671 1186 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHD9-215ENST00000565442 IGDCC3Q8IVU1 814 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 TP53I13Q8NBR0 393 aaPredicted RBP6.91□□□□□ -1.3
CHD9-215ENST00000565442 PWWP2AQ96N64 755 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 CRBNQ96SW2 442 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 EHMT1Q9H9B1 1298 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 ZNF408Q9H9D4 720 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 STRIP2Q9ULQ0 834 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 ZNRF3Q9ULT6 936 aa6.91□□□□□ -1.3
CHD9-215ENST00000565442 ATE1O95260 518 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 EIF6P56537 245 aaKnown RBP6.9□□□□□ -1.3
CHD9-215ENST00000565442 RTP5Q14D33 572 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 USHBP1Q8N6Y0 703 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 ENOX1Q8TC92 643 aaKnown RBP6.9□□□□□ -1.3
CHD9-215ENST00000565442 SYTL5Q8TDW5 730 aaPredicted RBP6.9□□□□□ -1.3
CHD9-215ENST00000565442 SHDQ96IW2 340 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 HHIPL1Q96JK4 782 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 HDAC8Q9BY41 377 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 ASCC2Q9H1I8 757 aaPredicted RBP6.9□□□□□ -1.3
CHD9-215ENST00000565442 ANTXR1Q9H6X2 564 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 REV1Q9UBZ9 1251 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 MYRFQ9Y2G1 1151 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 PRR36Q9H6K5 1346 aa6.9□□□□□ -1.3
CHD9-215ENST00000565442 NMIQ13287 307 aaPredicted RBP6.89□□□□□ -1.31
CHD9-215ENST00000565442 LDHDQ86WU2 507 aa6.89□□□□□ -1.31
CHD9-215ENST00000565442 PLCD4Q9BRC7 762 aa6.89□□□□□ -1.31
CHD9-215ENST00000565442 FOXP3Q9BZS1 431 aa6.89□□□□□ -1.31
CHD9-215ENST00000565442 KLHL14Q9P2G3 628 aa6.89□□□□□ -1.31
CHD9-215ENST00000565442 TMEM82A0PJX8 343 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 PRICKLE3O43900 615 aaPredicted RBP6.88□□□□□ -1.31
CHD9-215ENST00000565442 DNAJA2O60884 412 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 MPOP05164 745 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 IMPDH2P12268 514 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 HHIPL2Q6UWX4 724 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 TMC6Q7Z403 805 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 FAM169BQ8N8A8 192 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 PMFBP1Q8TBY8 1022 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 ARMC5Q96C12 935 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 CCDC74BQ96LY2 380 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 KLHL3Q9UH77 587 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 TCFL5Q9UL49 500 aa6.88□□□□□ -1.31
CHD9-215ENST00000565442 GIPRP48546 466 aa6.87□□□□□ -1.31
CHD9-215ENST00000565442 PCBP3P57721 371 aaKnown RBP6.87□□□□□ -1.31
CHD9-215ENST00000565442 RTP1P59025 263 aa6.87□□□□□ -1.31
CHD9-215ENST00000565442 MLECQ14165 292 aa6.87□□□□□ -1.31
CHD9-215ENST00000565442 RUFY4Q6ZNE9 571 aa6.87□□□□□ -1.31
CHD9-215ENST00000565442 LSRQ86X29 649 aaPredicted RBP6.87□□□□□ -1.31
CHD9-215ENST00000565442 DAGLBQ8NCG7 672 aa6.87□□□□□ -1.31
CHD9-215ENST00000565442 TCTN2Q96GX1 697 aa6.87□□□□□ -1.31
CHD9-215ENST00000565442 GPR20Q99678 358 aa6.87□□□□□ -1.31
CHD9-215ENST00000565442 HIRIP3Q9BW71 556 aaPredicted RBP6.87□□□□□ -1.31
CHD9-215ENST00000565442 PCDHA5Q9Y5H7 936 aa6.87□□□□□ -1.31
CHD9-215ENST00000565442 SSU72P8A0A1W2PR75 194 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 CHURC1-FNTBB4DL54 471 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 SMAD7O15105 426 aaKnown RBP6.86□□□□□ -1.31
CHD9-215ENST00000565442 KCNC1P48547 511 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 RBL2Q08999 1139 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 TMEM62Q0P6H9 643 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 OVOS1Q6IE37 1185 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 ANKS3Q6ZW76 656 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 CKAP2LQ8IYA6 745 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 VWCEQ96DN2 955 aa6.86□□□□□ -1.31
CHD9-215ENST00000565442 CNOT11Q9UKZ1 510 aaKnown RBP6.86□□□□□ -1.31
CHD9-215ENST00000565442 FFAR3O14843 346 aa6.85□□□□□ -1.31
CHD9-215ENST00000565442 BUB1BO60566 1050 aaPredicted RBP6.85□□□□□ -1.31
CHD9-215ENST00000565442 ARL4AP40617 200 aa6.85□□□□□ -1.31
CHD9-215ENST00000565442 RAB3GAP1Q15042 981 aa6.85□□□□□ -1.31
CHD9-215ENST00000565442 LRRFIP1Q32MZ4 808 aaKnown RBP6.85□□□□□ -1.31
CHD9-215ENST00000565442 ZFYVE27Q5T4F4 411 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms