RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 ELP1O95163 1332 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 MROH7Q68CQ1 1323 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 PATL2C9JE40 543 aaKnown RBP13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 CENPBP07199 599 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 BMP3P12645 472 aa13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 DNAJB2P25686 324 aa13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 GJA9P57773 515 aa13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 SLFN13Q68D06 897 aa13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 IFNL3Q8IZI9 196 aa13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 DCTPP1Q9H773 170 aa13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 HOMER2Q9NSB8 354 aa13.8□□□□□ -0.2
NSMCE1-209ENST00000565384 UNC80Q8N2C7 3258 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 TSPY3P0CV98 308 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 TSPY8P0CW00 308 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 CDK7P50613 346 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 PDE4BQ07343 736 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 GRIN2CQ14957 1233 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 MFSD5Q6N075 450 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 CCDC144CPQ8IYA2 1237 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 NEDD1Q8NHV4 660 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 VTI1AQ96AJ9 217 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 SEC62Q99442 399 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 NACAP1Q9BZK3 213 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 KATNBL1Q9H079 304 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 ACAD9Q9H845 621 aa13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-209ENST00000565384 TMEM232C9JQI7 657 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 ARVCFO00192 962 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 FDX1P10109 184 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 STAT2P52630 851 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 CNTN2Q02246 1040 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 PPARAQ07869 468 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 PPIGQ13427 754 aaKnown RBP eCLIP13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 FAM126BQ8IXS8 530 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 TIFAQ96CG3 184 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 NAPBQ9H115 298 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 MCM3APO60318 1980 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 CUL9Q8IWT3 2517 aa13.78□□□□□ -0.2
NSMCE1-209ENST00000565384 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 ZNF536O15090 1300 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 CTAGE5O15320 804 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 TLR3O15455 904 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 SLC3A2P08195 630 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 CSF2RAP15509 400 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 SLC1A4P43007 532 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 TFAP4Q01664 338 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 IKQ13123 557 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 TMEM240Q5SV17 173 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 TTC41PQ6P2S7 1318 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 CCDC174Q6PII3 467 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 C16orf59Q7L2K0 433 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 FAM160B2Q86V87 743 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 TMEM199Q8N511 208 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 STAG1Q8WVM7 1258 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 AGBL1Q96MI9 1066 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 FSD1Q9BTV5 496 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 ZNF576Q9H609 170 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 A1CFQ9NQ94 594 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 RNF146Q9NTX7 359 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 CDH23Q9H251 3354 aa13.77□□□□□ -0.21
NSMCE1-209ENST00000565384 A0A0C4DFX4 3053 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 ASTN1O14525 1302 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 SOWAHBA6NEL2 793 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 ERC2O15083 957 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 NKX3-2P78367 333 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 BEX3Q00994 111 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 TNFAIP2Q03169 654 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 TKFCQ3LXA3 575 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 CHMP4CQ96CF2 233 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 GMCL1Q96IK5 515 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 PBX4Q9BYU1 374 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 LRRC37A2A6NM11 1700 aa13.76□□□□□ -0.21
NSMCE1-209ENST00000565384 LAMA2P24043 3122 aaKnown RBP13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 ASB14A6NK59 587 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 CD4P01730 458 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 ACRP10323 421 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 ALAS1P13196 640 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 MCCP23508 829 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 PBX2P40425 430 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 CXCL17Q6UXB2 119 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 CCDC129Q6ZRS4 1044 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 NOL8Q76FK4 1167 aaKnown RBP13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 TLK2Q86UE8 772 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 TRERF1Q96PN7 1200 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 STX8Q9UNK0 236 aa13.75□□□□□ -0.21
NSMCE1-209ENST00000565384 GNEQ9Y223 722 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms